Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1695 ATGAAAAGAAGAAGAGAAGACGAGGGGGGTGAGGTAGATATGGCTAATTGTTTGATGCTATTGAACAAAGTTGGTGAAAGTGATGAGATTAGTTCATTGAGGGAGAGAGAGCTTAAGGATGGTGCTTTTAAGTGCAAAACTTGCAATAGAAGGTTCACTTCTTTTCAAGCCCTTGGAGGCCACAGAGCAAGTCACAAGAAGGCTAAGCTCATGGTTTCAGACCTATCGTGCCATCTTCACCAGTTACCGAGCTCAAAGCGAAGGATGCACCCATGCCCTATTTGTGGGCTTGAGTTTTCGATTGGACAAGCTCTTGGAGGGCACATGAGAAAGCACAGGGTTGCCACTAATAATGATGACAATCATCATGACATGATGAATATTCGTAAGCATCATGCCTTGCCCATCTTGAAGGAATCCAATAAAGATGCTATTAATAATAAGAAGAGGTTGAATTCGTGTTTGGACTTGAACTTGCCGCCATTGGAGAATGATCTTAAACTCGACCTAAGGATGGCTGTTCTCAATATTGTTTCATTTGATTGA 546 0.4212 MKRRREDEGGEVDMANCLMLLNKVGESDEISSLRERELKDGAFKCKTCNRRFTSFQALGGHRASHKKAKLMVSDLSCHLHQLPSSKRRMHPCPICGLEFSIGQALGGHMRKHRVATNNDDNHHDMMNIRKHHALPILKESNKDAINNKKRLNSCLDLNLPPLENDLKLDLRMAVLNIVSFD* 182
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1695 181 PANTHER CYS2-HIS2 ZINC FINGER TRANSCRIPTION FACTOR 10 175 - -
Dod10g1695 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 43 70 IPR013087 -
Dod10g1695 181 ProSitePatterns Zinc finger C2H2 type domain signature. 92 112 IPR013087 -
Dod10g1695 181 SMART c2h2final6 90 112 IPR013087 -
Dod10g1695 181 SMART c2h2final6 43 65 IPR013087 -
Dod10g1695 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 112 IPR013087 -
Dod10g1695 181 Pfam C2H2-type zinc finger 42 67 - -
Dod10g1695 181 Pfam C2H2-type zinc finger 90 113 - -
Dod10g1695 181 ProSitePatterns Zinc finger C2H2 type domain signature. 45 65 IPR013087 -
Dod10g1695 181 Gene3D Classic Zinc Finger 40 112 - -
Dod10g1695 181 SUPERFAMILY beta-beta-alpha zinc fingers 43 112 IPR036236 -
Dod10g1695 181 PANTHER ZINC FINGER PROTEIN ZAT5 10 175 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dod10g1695 Dod-Chr10 38073160 38074099 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1695 1 170 C2H2 Transcription Factor Family AT2G28710 45.402 3.23e-33 114
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod10g1695 zf-C2H2_6 1.7e-11 CL0361
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1695 - - gmx:100781211 182.185
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1695 10 38073160 38074099 Dod10g1695 10 38073160 38074099 ECH
Dod10g1695 10 38073160 38074099 Dod03g2898 03 61219861 61220624 ECH
Dod10g1695 10 38073160 38074099 Dod03g2898 03 61219861 61220624 PCT