Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1693 ATGGTTCAGCAAGAAGTCCGAAAAGGTCCGTGGACAGAAGAGGAAGACTTCAAGTTGGTCTCCATTGTTCGCTTGTTCGGAGACCGTAAATGGGATCTTATAGCTAAGGTATCAGGTTTGAATAGAACAGGTAAGAGCTGCAGGTTACGTTGGGTTAATTACCTTCACCCTGGCCTCAAACGTGGGAAGATGACACCCCAGGAAGAACGCCTCGTGCTGGAGCTTCATTCCAAATGGGGAAATAGGTGGTCAAGGATTGCTCGCAAGTTGCCAGGTCGCACAGACAATGAGATTAAGAACTACTTCAGGACACACATGAGGAAGAAGGCACAGGAGGAAAAGCAAGCAGCATCAGTTCCATCACTAACTTCCTCGAGTTGTCATTCCTCTGTGTCCTCAAACAACCTTCGTGCTGTTGATTCACATGCTTCCAAGAAGGCCGGAGAAGAAAGCTTTTATGACACAGGAGGACCCAACCTCATGGGGGGCTTAACCGATTTTAAGGTTAAGGTAGGAGATCAAGACAAAGAAGGTGAACAAGGGTTCTCTTTGGATGATATATGGAAAGATATTGATCTGTCAGAAGAGAACATTCTGCAGCCTTCAGTGTATGAGGGGCACACTGAAGGGGGTTGCAACTTCTCTTGCCCACCAGCGCCTTCTCCATCATGGGGGTATTCTTCTTACCCACTTTGGGTGATGGATGAAGAAAGCATGTTATTCCCTATAAGTGACCCTTATTTTTCGTGCTATGCAGAAGGCAACGCATTTCTAACCGGCTAA 783 0.4674 MVQQEVRKGPWTEEEDFKLVSIVRLFGDRKWDLIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYFRTHMRKKAQEEKQAASVPSLTSSSCHSSVSSNNLRAVDSHASKKAGEESFYDTGGPNLMGGLTDFKVKVGDQDKEGEQGFSLDDIWKDIDLSEENILQPSVYEGHTEGGCNFSCPPAPSPSWGYSSYPLWVMDEESMLFPISDPYFSCYAEGNAFLTG* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1693 260 SMART sant 7 57 IPR001005 -
Dod10g1693 260 SMART sant 60 108 IPR001005 -
Dod10g1693 260 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Dod10g1693 260 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Dod10g1693 260 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Dod10g1693 260 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
Dod10g1693 260 Gene3D - 1 60 - -
Dod10g1693 260 MobiDBLite consensus disorder prediction 107 133 - -
Dod10g1693 260 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Dod10g1693 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Dod10g1693 260 CDD SANT 63 106 IPR001005 -
Dod10g1693 260 MobiDBLite consensus disorder prediction 116 133 - -
Dod10g1693 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Dod10g1693 260 CDD SANT 10 55 IPR001005 -
Dod10g1693 260 PANTHER TRANSCRIPTION FACTOR MYB48-RELATED 3 240 - -
Dod10g1693 260 Gene3D - 64 133 - -
Dod10g1693 260 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 240 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1693 Dod-Chr10 38039060 38040752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1693 1 244 MYB Transcription Factor Family AT5G59780 54.941 2.92e-84 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod10g1693 Myb_DNA-binding 1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1693 K09422 - gmx:100776886 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1693 10 38039060 38040752 Dod10g1693 10 38039060 38040752 ECH
Dod03g2896 03 61173678 61175414 Dod10g1693 10 38039060 38040752 PCT