Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1682 ATGGCGAGAATCAAGGTGTACGAGCTCAGGAACAAGACGAAAGCAGAGCTTCTGAGCCAATTGAAGGATCTCAAAGCTGAGCTCGCTCTTCTCCGCGTCGCCAAGGTCACTGGCGGAGCACCAAACAAGCTCTCCAAAATAAAAATTGTGCGGCTGTCGATAGCGCAGGTGCTGACAGTGATTTCTCAGAAGCAAAAATTGGCATTGAGGGAAGCTTACAAGAAGAAGAAGTACCTGCCTTTGGATCTGCGTCCCAAGAAGACCAGAGCTATCAGAAGACGCCTCACCAAGCATCAGGCATCCTTGAAGACAGAGCGTGAGAAGAAGAAGGAATTGTACTTCCCATTGAGAAAATATGCAGTTAAGGCCAGGCGTAAGAAACAGAAGGTTCTAAAAGACGTTGCCTGCTTCTACCGCGTGAGCATATCGCTATCACCACTATGTTCTTTTACTCACAGCCCACCACCAACCCACGCTGATACGTTTCACGTAAGTATCCAGGGCAGCCAACAAGGGTCAGGTCAATATAATGAATCTTCGATCCTTTCACTTCTTTCCCTATAA 564 0.4752 MARIKVYELRNKTKAELLSQLKDLKAELALLRVAKVTGGAPNKLSKIKIVRLSIAQVLTVISQKQKLALREAYKKKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYAVKARRKKQKVLKDVACFYRVSISLSPLCSFTHSPPPTHADTFHVSIQGSQQGSGQYNESSILSLLSL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1682 187 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Dod10g1682 187 Gene3D - 78 123 - -
Dod10g1682 187 TIGRFAM L29: ribosomal protein uL29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Dod10g1682 187 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Dod10g1682 187 PANTHER 60S RIBOSOMAL PROTEIN L35 1 122 IPR045059 GO:0000463|GO:0022625
Dod10g1682 187 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Dod10g1682 187 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Dod10g1682 187 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 1 122 - -
Dod10g1682 187 CDD Ribosomal_L29_HIP 8 64 - -
Dod10g1682 187 Coils Coil 7 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1682 Dod-Chr10 37958205 37964366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1682 1 122 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 86.885 1.99e-69 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1682 K02918 - gmx:100789845 227.254