Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1673 ATGTATGCACACTCCAACACCTCATTCTCACTCGCCGCCACCCCATCACCGCTTCTCTTCACCGACCAGCTCGCCCTCAGCGAGTTCGACTCGCTGCAGGAGGAGACTCTCCCGCAACTCATCAACAACTCGGAGTTGAGCTACAATTATAATGGTAACAACAGCTGTAGCAGCGGTTACAGCAGCTACGGTGGGTCGCCAAGTCCTCTGGCGAGTCAGGGGTTGATGCTGCAGAGGAGCGTTAGTAGCCATTCTCTGCAGAAAAATGGGACCCAACACCAACACCAACACCAACACCACCCCTTTTCTGCTCTCTTCGCTGAGTTGTTCGACTCGGAGGACGGTCCCGTGAGGAGAGTTTACAGCACCGGTGATCTCCAGGGGATTAATGGAATGCAGCAAAATAATCATCGGTCTGAGAGTCCATTGTCAAGCGAAAGTAGTTTGATCATAGAAGGGATGAGCAGAGCCTGCCGATATAGCCCGGAGGAGAAGAAGGTCAGGATTGAGAGGTATAGAAGCAAGAGAAACCAGAGGAACTTCAACAAGAAAATTAAGTATGCTTGCAGGAAGACATTGGCAGATAGCAGGCCACGCATCCGAGGAAGGTTTGCAAGGAATGACGAAATTGACAAGAACCCTCCAGTTCAGTTGAGCCATAATATTGGTACTGCAGATCAGGAAGAAGATGAAGAAGACGAGAATTGGATGAGTATCTTTGATACCTTAGTGGCTGCAAATATGGATCAGGAGTCTCAAGGCAGTTCTTCCTTTGGTTCATTGTATTAG 789 0.4918 MYAHSNTSFSLAATPSPLLFTDQLALSEFDSLQEETLPQLINNSELSYNYNGNNSCSSGYSSYGGSPSPLASQGLMLQRSVSSHSLQKNGTQHQHQHQHHPFSALFAELFDSEDGPVRRVYSTGDLQGINGMQQNNHRSESPLSSESSLIIEGMSRACRYSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKNPPVQLSHNIGTADQEEDEEDENWMSIFDTLVAANMDQESQGSSSFGSLY* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1673 262 MobiDBLite consensus disorder prediction 209 232 - -
Dod10g1673 262 Pfam CCT motif 167 207 IPR010402 GO:0005515
Dod10g1673 262 MobiDBLite consensus disorder prediction 76 99 - -
Dod10g1673 262 ProSiteProfiles CCT domain profile. 165 207 IPR010402 GO:0005515
Dod10g1673 262 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 3 262 IPR045281 GO:0009909
Dod10g1673 262 PANTHER CCT MOTIF PROTEIN 3 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1673 Dod-Chr10 37856014 37858526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1673 161 212 C2C2-CO-like Transcription Factor Family AT5G15850 48.077 4.90e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod10g1673 CCT 9.8e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1673 - - gmx:102661609 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1673 10 37856014 37858526 Dod10g1673 10 37856014 37858526 ECH
Dod10g1673 10 37856014 37858526 Dod03g2866 03 60756552 60759837 PCT