Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1666 ATGGCTGAAGGGTTGTTTTGTAGTCTCCTCGGCTTATTAATAATTATTTCTTCTTCAACCATTTGCTGGCCTTTGTGTTGTTTTGTTCAACGTCTCTCTTTTTTCCTTCTCCCTCTCACGTGTTGCTTTGTTTTTTTTTTTTGTTATGTTTCAGTAGATAATAATGTGGTCAGAGTTGATTTGAACGTGAATGGTGGTGGTAAAAGAGAAGACAATTCCAAGGATTATCAACTCTCTCTGGACGTGGAGAATTTGAACTTGAGTGAGGATGGTAAAGGTAAAGGTTGCATGAGGTTCACCTTTGATGAGCTTGCAGTTGCAACAGGAAATTTTAGGCCAGATTGCTTTCTTGGCGAAGGAGGTTTTGGCAAGGTTTATAAAGGCCACTTGGAGAAGATAAATGAGGTTGTAGCTATAAAACAACTTGACCTTCATGGCATTCAAGGAATTAGGGAATTTATTGTTGAAGTGGTTACATTGAGTATGGCAGATCACCCTAATTTGGTCAAGTTGATTGGGTGTTGTGCTGAGGGACAGCAGAGGCTGTTGGTTTATGAGTACATGCCATTGAGATCTTTGGAGAACCATTTGCATGATCTTTCGCCGGGAAGAAAACCACTAGATTGGAATACAAGGATGAAAATTGCAGCGGGTGCAGCTATGGGGTTGGAGTATTTGCATCATAAAGTGAAGCCACCTATAATATACCGTGACCTGAAATGCTCTAATATTTTGTTAGGAGAGGGATATCATGCTAAATTATCTGATTTTGGCTTGGCAAAAGTGGGCCCAAGTGGCGATAAGACCCATGTTTCGACAAGGGTTATGGGAACATATGGGTACTGTGCCCCGGATTATGCAATGACGGGCCAGTTGACATTCAAGTCTGATATTTATAGCTTCGGTGTTGTTCTTTTGGAGCTCATCACGGGAAGGAAGGCTATTGACCATACAAAACCTGCTAAAGAACAAAATCTAGTTGCATGGGCAAGGCCTCTATTCAAAGATCGGAAAAGATTCTCACAGATGGTTGACCCCTTGCTAGAAGATGAATATCCAGTGAAAGGTTTGTACCAAGCCCTTGCCATTGCCGCAATGTGTGTTCAAGAGCAGCCTAATATGCGACCTAGTACTCCGGATGTGGTCATAGCTCTAAATTACCTCGCTTCCCAGGAATATGATTCCCAATTTCATCTAGTACAGAGCTCAAGAAGTCCATTTTTTCAAAGACAGAGAAGGGATGGTCACAGACTTGCCCTCAGTGATGCTTCCGAGACAGACAAATCTGGAGATTAG 1296 0.4205 MAEGLFCSLLGLLIIISSSTICWPLCCFVQRLSFFLLPLTCCFVFFFCYVSVDNNVVRVDLNVNGGGKREDNSKDYQLSLDVENLNLSEDGKGKGCMRFTFDELAVATGNFRPDCFLGEGGFGKVYKGHLEKINEVVAIKQLDLHGIQGIREFIVEVVTLSMADHPNLVKLIGCCAEGQQRLLVYEYMPLRSLENHLHDLSPGRKPLDWNTRMKIAAGAAMGLEYLHHKVKPPIIYRDLKCSNILLGEGYHAKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHTKPAKEQNLVAWARPLFKDRKRFSQMVDPLLEDEYPVKGLYQALAIAAMCVQEQPNMRPSTPDVVIALNYLASQEYDSQFHLVQSSRSPFFQRQRRDGHRLALSDASETDKSGD* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1666 431 ProSiteProfiles Protein kinase domain profile. 111 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1666 431 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Dod10g1666 431 CDD STKc_IRAK 117 382 - -
Dod10g1666 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Dod10g1666 431 Gene3D Transferase(Phosphotransferase) domain 1 188 406 - -
Dod10g1666 431 Gene3D Phosphorylase Kinase; domain 1 96 187 - -
Dod10g1666 431 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 80 414 - -
Dod10g1666 431 PANTHER OS07G0668900 PROTEIN 80 414 - -
Dod10g1666 431 Pfam Protein kinase domain 117 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1666 431 SMART serkin_6 111 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1666 431 SUPERFAMILY Protein kinase-like (PK-like) 98 406 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1666 Dod-Chr10 37749601 37753627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1666 64 390 Glycoside Hydrolase AT3G07070 59.760 7.10e-140 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dod10g1666 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1666 - - gmx:100794680 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1666 10 37749601 37753627 Dod10g1666 10 37749601 37753627 ECH
Dod10g1666 10 37749601 37753627 Dod03g2858 03 60630322 60634228 PCT