Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1644 ATGGAGGGAAGTGACACAAACACACCTATTGTTTCTTCCGCTGCTCCTACTCCTCCAGTATCTTCTTCTCATAATAACTCTCCCACTAATTCCTCATGTTCCCCTCCTCTTCCGGTTCCCCAAGTTGTGATGAGCCCTTGTGCTGCTTGCAAGATCTTGAGGCGGAGGTGTGCTGAGAAATGTGTGTTGGCACCTTATTTCCCTCCCACTGAACCTGCCAAGTTCACCACTGCCCACCGAGTCTTTGGAGCTAGTAACATCATCAAGTTCTTACAGGAGCTTCCAGAGTCTCAAAGAGCTGATGCAGTGACCAGCATGGTGTATGAGGCTGGTGCAAGAATAAGGGACCCGGTATACGGTTGTGCAGGTGCAATCTGCCAGCTCCAAAAGCAAGTCAATGAGCTTCAAGCACAGTTAGCAAAGGCACAAGCTGAGGTTGTAAACATGCAGTTCCAACAGGCCAATCTCGTGGCTCTAATTTGCATGCAAATGGCAGAGAAGCCACAGGAATCATCACCACAACAATCATTGGACAACTTCATCTCAAGCCCTCCTCACAGCACCGGCTATCAAAACAATAATCTCAACTTCTTTGAGGAGAACACTAGCCTAAACTCAATGTGGGAGCCTCTTTGGACATGA 642 0.4813 MEGSDTNTPIVSSAAPTPPVSSSHNNSPTNSSCSPPLPVPQVVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTTAHRVFGASNIIKFLQELPESQRADAVTSMVYEAGARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAEVVNMQFQQANLVALICMQMAEKPQESSPQQSLDNFISSPPHSTGYQNNNLNFFEENTSLNSMWEPLWT* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1644 213 MobiDBLite consensus disorder prediction 1 35 - -
Dod10g1644 213 Coils Coil 125 152 - -
Dod10g1644 213 ProSiteProfiles LOB domain profile. 45 146 IPR004883 -
Dod10g1644 213 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 33 210 - -
Dod10g1644 213 Pfam Lateral organ boundaries (LOB) domain 46 143 IPR004883 -
Dod10g1644 213 MobiDBLite consensus disorder prediction 1 32 - -
Dod10g1644 213 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 33 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1644 Dod-Chr10 37408953 37411469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1644 41 213 AS2 family AT1G07900 66.477 3.31e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod10g1644 LOB 3.4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1644 - - gmx:100789504 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1644 10 37408953 37411469 Dod10g1644 10 37408953 37411469 ECH
Dod10g1644 10 37408953 37411469 Dod03g2838 03 60260789 60263091 ECH
Dod10g1644 10 37408953 37411469 Dod03g2838 03 60260789 60263091 PCT