Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1637 ATGTCGGTAATAGACATCCTCTTCCGGGTCGACAACATATGCCAGAAATACGACAGATACGACATTGACAAGCAGCGCGAGCTCAACGCCCATGGCGATGATGCCTTCGCTCGCCTCTATGCTGCTGTTGAATCCACTATTCAAGCTGCCCTCAATAAATCGGAGGTTGCTTTGACGGAGAAGAACAGGGCAGCTGCTGCGGCTTTGAATGCTGAGGTCCGTAGAACCAAAGGTAGACTTATGGACGAGGTTCCTAAACTCCGCAAATTGGCCCATAAGAAGGTTAAAGGTCTCACAGATGAAGATCTAGCCATTCGTCAAGATATTGTTCAAGCATTGCCGGAAAGAATCCAAGCAATGCCGGATGGCATTACTGGTGCTGCCAATCAAACTGGACCATGGACCGCTTCCTCATCTCATCCGCATATCAAGTTTGATTCTTCAGATGCACATCTTGACAGTGAGTATTTCAATCAAAGTGAAGAGTCCAGTCAATTTAGGCAAGAGTATGAGCTGCGCAAGATGAAACAGGATGAAGGGCTTGTTATCATATCAGAGGGACTGGATACCTTGAAGAATCTAGCCCATGATATGAATGAGGAATTAGATAGGCAAGTTCCTCTAATGGACGAAATTGACACAAAGGTGGATAGGGCAAGAGATGATGTGAAAAACACTAACGTAAGGTTGAAGAAAACTCTCACTGAGCTGAGATCTAATCAAAATTTCTGCATCGACATCATTCTGCTGTGTGTTCTTCTGGGCATCATTCTCTTTATATACAATGCACTGAGGTGA 798 0.4486 MSVIDILFRVDNICQKYDRYDIDKQRELNAHGDDAFARLYAAVESTIQAALNKSEVALTEKNRAAAAALNAEVRRTKGRLMDEVPKLRKLAHKKVKGLTDEDLAIRQDIVQALPERIQAMPDGITGAANQTGPWTASSSHPHIKFDSSDAHLDSEYFNQSEESSQFRQEYELRKMKQDEGLVIISEGLDTLKNLAHDMNEELDRQVPLMDEIDTKVDRARDDVKNTNVRLKKTLTELRSNQNFCIDIILLCVLLGIILFIYNALR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1637 265 SMART tSNARE_6 166 233 IPR000727 -
Dod10g1637 265 Coils Coil 220 240 - -
Dod10g1637 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Dod10g1637 265 PANTHER SYNTAXIN 1 261 IPR045242 -
Dod10g1637 265 PANTHER SYNTAXIN-72 1 261 - -
Dod10g1637 265 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Dod10g1637 265 CDD SNARE_Qc 176 232 - -
Dod10g1637 265 SUPERFAMILY SNARE fusion complex 164 232 - -
Dod10g1637 265 Gene3D - 172 232 - -
Dod10g1637 265 Pfam SNARE domain 208 258 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1637 Dod-Chr10 37293422 37295717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1637 1 265 SNARE and Associated Proteins AT3G09740 66.667 2.50e-132 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1637 K08506 - gmx:100777251 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1637 10 37293422 37295717 Dod10g1637 10 37293422 37295717 ECH