Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1636 ATGGAGGGGGATCAAAAGGCTTCTAACTACACTTTTCCACCTGGTTTCAGATTCCACCCATCTGATGAGGAGCTCATAGTTCATTACCTTCAAAACAAAATCAGCTCACGTCCACTTCCAGCATCCATTATAGCTGAAATAGATCTTTATAAGTATAACCCCTGGGATTTACCAAAAAAGGCTTTGTTTGGGGAGGAAGAATGGTACTTCTTTAGCCCCCGAGACCGGAAGTACCCAAATGGGTTAAGGCCAAACAGAGCAGCAGGTTCAGGATACTGGAAGGCAACCGGAACTGACAAGCCAATTCTTACTTCTCGTGGATCGAATCGCATAGGGGTGAAGAAAGCTCTGGTGTTTTATTCAGGCAGACCTCCAAAGGGGACTAAGACTGACTGGATCATGAATGAGTATAGATTGGTTGACACAACCACCAAACCCTCCAGGCTAAAAGGTTCTATGCGGTTGGATGACTGGGTACTATGTCGGGTTCGACACAAAGGCTATACATCAAAGAATTCATGTGAAAATCAAGATAATACCTGTGAATCAACCTTGCTATCAAATCTACCAAGGTGTGAAGATTACCCAACAAACACGAACTTTCAGTCTGACATGATCAATGATTATCAATACAAAGACTATCATCAGATCATGGCCTCTATCCTCGTTGGAGTTGGCCCTATACCTCCCATTGAGAACATGTCAAGTTTGAACTTTAAGGGCAGCAGAGGAAATGGCCTAACTTCAGTTTATGAAGATGGTTTCAATAAAGAGAATTCTCAGATGACAATTCCTCCGTTGGACAGTTACTTAAACACACTGAAAAGAAAATCTAATGAGGATTATGAGAATCTCATTTCTTTTAACAGGAAGTTCAGAACTGAGAACAAAGTAGACGAATCTTATAGGACAAATAGAGCGTTGAACTGCTATAACCAAAACCAGTCTCAAGATCAGATTTTCAATGGGAGCCCACCAGAGCCTAGCATCAATTTTCAGGAGCTAAATGAATTAGCCTTTACAGGAAGATACCCGCAATGA 1041 0.4169 MEGDQKASNYTFPPGFRFHPSDEELIVHYLQNKISSRPLPASIIAEIDLYKYNPWDLPKKALFGEEEWYFFSPRDRKYPNGLRPNRAAGSGYWKATGTDKPILTSRGSNRIGVKKALVFYSGRPPKGTKTDWIMNEYRLVDTTTKPSRLKGSMRLDDWVLCRVRHKGYTSKNSCENQDNTCESTLLSNLPRCEDYPTNTNFQSDMINDYQYKDYHQIMASILVGVGPIPPIENMSSLNFKGSRGNGLTSVYEDGFNKENSQMTIPPLDSYLNTLKRKSNEDYENLISFNRKFRTENKVDESYRTNRALNCYNQNQSQDQIFNGSPPEPSINFQELNELAFTGRYPQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1636 346 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Dod10g1636 346 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
Dod10g1636 346 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Dod10g1636 346 SUPERFAMILY NAC domain 9 166 IPR036093 GO:0003677|GO:0006355
Dod10g1636 346 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 306 - -
Dod10g1636 346 PANTHER NAC TRANSCRIPTION FACTOR 56 1 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1636 Dod-Chr10 37290741 37293203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1636 12 175 NAC Transcription Factor Family AT1G61110 68.605 2.77e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod10g1636 NAM 1.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1636 - - gmx:100817193 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1636 10 37290741 37293203 Dod10g1636 10 37290741 37293203 ECH