Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1627 ATGAACAATAATCGCCTTTCAATTGACAAAATGATGGGCTGTTTTAGTTGCTTTGGGTTAATCAAGAAACCAAGATGTGAAAGGGCTAAGCCTGGCATCAAGAATTTTCTCTCCCAGCAGCTATTGCCGGGTGGAGAAACTGAAGATGATGATGATGCCTCGTATAGTGGTGAGTTCACCGCCAGTGGAGATGAAAGTGAGGGGCACCCTCAAGGCAACCGTTCAGAAGAAATTCTGAACTTGAGAGCAGAGAATGACATGATTTGTAGGCGGTTTCCTGTCAAGGATACTAACAAACTTGTTCGCTCGGAGGATGATAATGGGAACAAGATGATCAATGAGTACGTTCGAGAGTACAAGATTGGTTGTGGTAGCTATGGCAAAGTGGCTCTTTATCGAAGTTGTGTAGATGGAAAGCATTATGCAATTAAGGGCTTTCATAAGTCTCATTTACTGAAGCTTCGGGTTGCACCCTCTGAGACCGCCATGACTGATGTTCTACGTGAGGTACTAATTATGAAAATGCTGGAACATCCTAATATAGTCAATCTCATTGAGGTGGTTGATGACCCAGAGTCAGATGACTTCTACATGGTATTAGAATATGTGGAAGACAAATGGATTTGTGAGGGTTCAGGTCGTGGTTGTGCCTTAGATGAAGAGACTGTTAGGAAGTACTTGCGTGATATAGTCTCAGGATTAACATATCTTCATGCCCATAATATAGTGCATGGGGATATTAAACCTGACAACCTGTTGGTTACTCGTCATGGTACGGTAAAGATAGGAGATTTCAATGTCAGCCAGGCATTTGAGGATGATAATGATGAACTTCGTCGATCACCTGGCACTCCTGTTTTCACTGCACCAGAATGTTGTTTAGGTCTTACTTACCACGGTAAAGCTTCAGACACATGGGCAGTGGGAGTTACTTTGTACTGTATGATATTGGGTGAATACCCATTTCTCGGAGACACACTTCAAGATACATATGACAAAATAGTCAATAATCCTTTAGTTCTTCCAGATGACATTAACCCGCAGTTAAAGAACTTAATTGAAGGACTACTTTGCAAAGACCCAAAAGTAAGGATGACGCTGGGTGATGTTGCGGAGCATAGTTGGGTTATTGGAGATGATGGGCCAATTACTGAGTACTTATGTTGGTGCAAGCGCAAGAGCCTTGTGAAAGAAGAAGACCTTTGA 1206 0.4237 MNNNRLSIDKMMGCFSCFGLIKKPRCERAKPGIKNFLSQQLLPGGETEDDDDASYSGEFTASGDESEGHPQGNRSEEILNLRAENDMICRRFPVKDTNKLVRSEDDNGNKMINEYVREYKIGCGSYGKVALYRSCVDGKHYAIKGFHKSHLLKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVVDDPESDDFYMVLEYVEDKWICEGSGRGCALDEETVRKYLRDIVSGLTYLHAHNIVHGDIKPDNLLVTRHGTVKIGDFNVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPDDINPQLKNLIEGLLCKDPKVRMTLGDVAEHSWVIGDDGPITEYLCWCKRKSLVKEEDL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1627 401 SUPERFAMILY Protein kinase-like (PK-like) 111 387 IPR011009 -
Dod10g1627 401 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 3 399 - -
Dod10g1627 401 Pfam Protein kinase domain 115 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1627 401 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Dod10g1627 401 Gene3D Phosphorylase Kinase; domain 1 109 212 - -
Dod10g1627 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Dod10g1627 401 MobiDBLite consensus disorder prediction 37 73 - -
Dod10g1627 401 ProSiteProfiles Protein kinase domain profile. 115 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1627 401 SMART serkin_6 115 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1627 401 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 3 399 - -
Dod10g1627 401 CDD STKc_LKB1_CaMKK 121 376 - -
Dod10g1627 401 Gene3D Transferase(Phosphotransferase) domain 1 213 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1627 Dod-Chr10 37187581 37192830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1627 110 383 CBL-interacting serine-threonine protein kinases AT5G35410 32.482 9.75e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Dod10g1627 Pkinase 1.1e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1627 K00908 - gmx:100776013 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1627 10 37187581 37192830 Dod10g1627 10 37187581 37192830 ECH