Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1625 ATGGGGAACACGAGCAGTAGTGTCATTAGCCGCCGCAGGCACCGTAGGAGGAGGCACCACCCTCAACTGCCCAACGACGCCGTTGACGTGGCCGGCGCCGCACCACACCCTCCTCCTCCTCAGTATCCAAACACGGTTCTGCCTCCTTATCACCCCTACCCGCGATTATCATCGGCTCCACTTGATCATGGGCCGGTTGAAGGTTGCGTTTGGCAGGAGAAAGCGGTGACGATAAGGAATGATGTTAATATAAAGAAGGAGACGCTGAGGATGGAGCCTGATCTTGACAACCCCCGTTATTTTCTCCTCGCTTTCACCTTTGATGCCACTGCACCTGGATGCATTACAGTAATGTTTTTTGCCAAGGAGACATTAGATGGTAAGTTGATAGCAGTAAAGAACAGCTTGCTCAAGCAAATCTCAATGCCTTTTCAGAAAGGTCTTTGTCAGAAATTTAGGCAACCTTCTGGAACTGGTATTGAGCTCTCAATGTTTGAGGAGAGAGGAATAACAAAACAAGGTGATAAAGAAGTTTATCCTCTTGTGGTGAAGGCAGAGACTCGACCATTAAACCGTTATGAAACTGATGGAAACCTAACTTCTCAAATTACATTGGCATGTTTTGAGAAGAAAGAGAAAGGAGGATACAAGGTCCAAGTTATGAAACAGGTTCTCTGGGTTAATGGGATGAGGTATGAACTGCAGGAGGTATACGGCATTGGGAATGCTAGTGATGGTGGCATTGGCAGCAATGAGTCCGGGGGAGAATGTGTAATTTGCTTGTCTGAACCGCGAGACATGCTTATCCTCCCTTGCCGACACATGTGCATGTGCAGTGGCTGTGCCAATCTTCTGAAAGCACACACAACCAAGTGCCCCATTTGTCGGCATCCAGTTGAGAGGCTCTTGGAACTCAAGGTAAATGATGGGTCTGGTAGCACTGATGAAGGTCTTAAATCAAATGGAATATAA 972 0.4743 MGNTSSSVISRRRHRRRRHHPQLPNDAVDVAGAAPHPPPPQYPNTVLPPYHPYPRLSSAPLDHGPVEGCVWQEKAVTIRNDVNIKKETLRMEPDLDNPRYFLLAFTFDATAPGCITVMFFAKETLDGKLIAVKNSLLKQISMPFQKGLCQKFRQPSGTGIELSMFEERGITKQGDKEVYPLVVKAETRPLNRYETDGNLTSQITLACFEKKEKGGYKVQVMKQVLWVNGMRYELQEVYGIGNASDGGIGSNESGGECVICLSEPRDMLILPCRHMCMCSGCANLLKAHTTKCPICRHPVERLLELKVNDGSGSTDEGLKSNGI* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1625 323 PANTHER - 1 313 - -
Dod10g1625 323 Pfam Zinc finger, C3HC4 type (RING finger) 255 301 - -
Dod10g1625 323 SMART ring_2 257 295 IPR001841 -
Dod10g1625 323 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 256 296 IPR045195 -
Dod10g1625 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 245 305 IPR013083 -
Dod10g1625 323 ProSiteProfiles Zinc finger RING-type profile. 257 296 IPR001841 -
Dod10g1625 323 SUPERFAMILY RING/U-box 256 301 - -
Dod10g1625 323 PANTHER MAHOGUNIN 1 313 IPR045194 GO:0061630
Dod10g1625 323 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1625 Dod-Chr10 37162931 37165838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1625 70 276 C3H Transcription Factor Family AT3G09770 56.019 5.15e-75 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1625 - - gmx:100816136 426.402