Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1618 ATGCGATTGCTATGGTGGCTAATGTTGCCCCTATTGATACTGATTCAACTTTTATCCCCCAACAAATCAACCTGCAGATTATACGCTGAGGCTTTGTCCACTTTCAAAGGTTCACTTGGCGGTCCACGGCAATTTGGATGCAGCATTGTGAAATATCCATGTCAAATGCAATGGCCATGTGTTGACTGCCACAAACAGAAAGATCCAGGTGCTTTTTCTCTGATTCTCTGTGAAATAACAGCAAAGATAGATGGGAACAATGACATTCCTACACTCACATCACCTGTTCAAGCGGTTAAGAGGCCAGGTGGAAAAAGGGCTGCTGCTGCAGTTGGTGGTGGTGTTGCTGCCTTAATAGTTCTTGTCATTGTGATAATTGTCTATATCTGCTTGATGCGTGTCAAACGACTTATGAGGCAAGCATCTGAGACTGCTTCTTCTATGCCATCTCCCACTGTTGAGATGGGAAGAGACAACAACTCACAATACGTAAATCATCTGTCTCCACACTATATGCCAAATGCAAGGCAGTTAACAATATTGGAACTAGAACAAGCTACACTAAATTTCAGTCAAAGTAATATTATGGGTGAAGGTGGATTTGGTTTAGTATATAAGGGCTTGCTTCAAGATGGATCTATTGTGGCTATAAAAAGGCGCATATTTGCTCTAAGACCGGATTTCAACCGTGAGGTGAAGCAGATAGCTCACATCCACCACATCCATCTAGTCAAGCTTATAGGCTACTATGAAGATGGCTATCAACAATTACTAGTGTATGAATATCTCCCTAATGGCCATGTAGGGAATCACCTATATGATAGTGAAGGTCTGCCTATTGGAAAGTTGGACTTGTGGAGAAGGTTATCCATCGCTCTAGGCGCCTCAAAAGGACTGGAACATCTTCACAGTTTGGTCCCTCCATTGGTTCACACAAATTTTAGAACTAGAAATGTTCTTTTGGATGAAAGCTACACTGCCAAGGTTTCTGATTATGGATTCTTCAAATTGCAAATAAATGGGGATCAGGCTGGTTCATCTTCAAACATGGACTGCTTTCTTGACCCAGAGATGAGTTCATCACAAAACTATACAGAGCAGAGTGATGTATATTCTTTTGGGGTCTTCTTACTAGAGTTGATTAGTGGGTGTGAAGCACATAACAAAAACATCTCAACCCCAGAAGAAAATCTAGTATTTCAGTTTTTGAAGGCAAAAAATAGCGATCACTTGGACATGTTCATTGACATAACACTAGGAGACCATGAAAAGCATGCTGCTAGAAGAATGATGAGGTTGGTGTTGCTATGCATGGACATGAGTTTTAGGAGGCCATCAATGGGGCAAATTGTGCAAGAGCTGGAGCGGATTCAAGGAGAAATTGCTCCTTTGTATTCCCAAGCCAATGAGGAGATTGGTGCGGTGACTCTTGGGAGTGAACTCTTCCAATAA 1452 0.4187 MRLLWWLMLPLLILIQLLSPNKSTCRLYAEALSTFKGSLGGPRQFGCSIVKYPCQMQWPCVDCHKQKDPGAFSLILCEITAKIDGNNDIPTLTSPVQAVKRPGGKRAAAAVGGGVAALIVLVIVIIVYICLMRVKRLMRQASETASSMPSPTVEMGRDNNSQYVNHLSPHYMPNARQLTILELEQATLNFSQSNIMGEGGFGLVYKGLLQDGSIVAIKRRIFALRPDFNREVKQIAHIHHIHLVKLIGYYEDGYQQLLVYEYLPNGHVGNHLYDSEGLPIGKLDLWRRLSIALGASKGLEHLHSLVPPLVHTNFRTRNVLLDESYTAKVSDYGFFKLQINGDQAGSSSNMDCFLDPEMSSSQNYTEQSDVYSFGVFLLELISGCEAHNKNISTPEENLVFQFLKAKNSDHLDMFIDITLGDHEKHAARRMMRLVLLCMDMSFRRPSMGQIVQELERIQGEIAPLYSQANEEIGAVTLGSELFQ* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1618 483 Pfam Protein tyrosine and serine/threonine kinase 193 454 IPR001245 GO:0004672|GO:0006468
Dod10g1618 483 Gene3D Phosphorylase Kinase; domain 1 161 262 - -
Dod10g1618 483 SUPERFAMILY Protein kinase-like (PK-like) 169 462 IPR011009 -
Dod10g1618 483 Gene3D Transferase(Phosphotransferase) domain 1 263 474 - -
Dod10g1618 483 ProSiteProfiles Protein kinase domain profile. 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1618 483 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 78 481 - -
Dod10g1618 483 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 78 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1618 Dod-Chr10 37120052 37123771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1618 106 457 Receptor kinase-like Gene Family AT1G79620 34.146 2.29e-50 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Dod10g1618 PK_Tyr_Ser-Thr 1.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1618 - - gmx:100780443 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1618 10 37120052 37123771 Dod10g1618 10 37120052 37123771 ECH