Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1616 ATGGCGAAAGATGTTGAGGTTGTTGAGCAAGGGCAAGGAGAGTACAGTGCTAAGGACTACCATGATCCTCCTCCGGCTCCATTGATCGATGTGGAGGAGCTGACAAAGTGGTCCTTGTACAGAGCGGTGATAGCGGAGTTCGTAGCAACGCTTCTGTTCCTTTACATCACAGTGTTGACCATCATTGGCTACAAGAGCCAGACCGACCCCAACAAGGTTGGTACCTCAGAGTGTGATGGGGTTGGCATCTTGGGCATAGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACAGCTGGAATCTCCGGTGGGCACATAAACCCGGCGGTGACATTCGGGCTGTTCGTGGGGCGCAAAGTGTCCCTGATCAGGGCTCTGTTGTACATGATAGCACAGTGCGCAGGTGCTATCTGCGGTGCTGGTCTCGCCAAGGGCTTCCAAAAAGCTTACTATGTCAGGTATGGTGGTGGGGCCAACCTTGTGAGCCATGGCTACAACAAAGGTACCGCTTTGGGTGCTGAGATCATTGGTACCTTCGTTCTTGTCTACACTGTCTTCTCTGCCACTGATCCCAAGAGGAGCGCTAGGGACTCCCATGTTCCTGTAAGTACCTTTATTTTTTCATTTCTTTCTTTTAAGTATCTAGCACCCCCCTTGATTAATATTTACATTTTTCTCTTACTTACTTATTAA 702 0.4943 MAKDVEVVEQGQGEYSAKDYHDPPPAPLIDVEELTKWSLYRAVIAEFVATLLFLYITVLTIIGYKSQTDPNKVGTSECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFVGRKVSLIRALLYMIAQCAGAICGAGLAKGFQKAYYVRYGGGANLVSHGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVSTFIFSFLSFKYLAPPLINIYIFLLLTY* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1616 233 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod10g1616 233 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod10g1616 233 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod10g1616 233 PRINTS Major intrinsic protein family signature 176 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod10g1616 233 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 207 IPR034294 -
Dod10g1616 233 Pfam Major intrinsic protein 33 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod10g1616 233 ProSitePatterns MIP family signature. 108 116 IPR022357 -
Dod10g1616 233 PANTHER AQUAPORIN PIP2-7 1 207 - -
Dod10g1616 233 SUPERFAMILY Aquaporin-like 32 210 IPR023271 -
Dod10g1616 233 Gene3D Glycerol uptake facilitator protein. 26 230 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1616 Dod-Chr10 37109540 37111754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1616 1 205 Major Intrinsic Protein MIP AT2G37180 76.585 1.69e-111 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1616 K09872 - gmx:732604 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1616 10 37109540 37111754 Dod10g1616 10 37109540 37111754 ECH
Dod10g1616 10 37109540 37111754 Dod03g2799 03 59848061 59850373 ECH