Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1609 ATGGCTATGGCTGTGGCTCAGCACAGAGAAAGCAGCAGCAGTGGCAGCATTGACAAGCACCTTGATTCTGGCAAATACGTGCGTTATACTGCTGAGCAGGTTGAAGCTCTCGAACGGGTTTATGTTGAGTGCCCAAAACCCAGTTCATTGAGGAGGCAGCAGTTGATCAGGGAGTGCCCCATTCTTTCAAACATCGAGCCAAAGCAAATCAAGGTTTGGTTCCAGAACCGAAGGTGTAGAGAGAAGCAGAGGAAAGAGGCTTCTCGGCTTCAGACTGTGAACCGGAAGCTGACAGCAATGAACAAGCTGTTGATGGAGGAGAACGATCGGTTGCAGAAACAGGTGTCACAGCTGGTGTCTGAGAATGGGTATATGCGGCAGCAGTTGCATACTCTGCAGCCGTCGGCAGTGGCTACTGATGCAAGTGGTGATTCGGTGGTTACTACTCCTCAGCAATCTATGAGAGATGCTAATAATCCTGCTGGATTCCTAGCAATTGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCACAAAGTTGCAGTGGAGTGGCAGCTCGAGCCTGTGGTCTTGTTAGTTTAGAACCTACAAAGATTGCAGAGATCCTAAAAGATCGCACATCTTGGTTTCGAGATTGTCGGAGTCTAGAGGTTTTCACAATGTTCCCTGCTGGAAATGGAGGTACAATTGAACTTGTTTACACACAGACATATGCTCCAACCACACTGGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACTACAACACTGGAAAATGAAAGTCTTGTGGTTTGTGAGAGATCACTATCTGGTTCTGGCGCTGGACCTAATGCAGCTGCTGCTGCTCAGTTTGTGAGGGCTGAAATGCACCCTAGTGGCTACCTGATTCGACCATGTGAAGGTGGAGGTTCAATCATCCACATTGTAGACCACCTAAACCTTGAGGCATGGAGTGTGCCAGAAGTGCTGCGACCGCTTTATGAATCATCAAAAGTGGTAGCTCAAAAGATGACAATTGCGGCACTACGCTATATCAGGCAAATAGCTCAGGAAACAAGCGGTGAAGTGGTTTATGGCTTGGGTAGGCAACCTGCTGTCCTGAGAACTTTTAGTCAAAGGCTGAGCAGAGGCTTCAATGATGCTGTCAATGGATTCAATGATGATGGCTGGTCTGTACTGAATTGCGATGGTGCTGAGGATGTAATTATTGCTGTTAATTCAACCAAGAATTTGAGTGGCACTTCTAATCCAGCAAGTTCCCTTTCATTCCTTGGAGGAATTCTCTGTGCAAAAGCTTCTATGTTACTCCAAAACATCCCTCCTCCAGTTTTGGTTCGCTTCCTGAGGGAGCATCGCTCAGAGTGGGCTGATTTTAATGTTGATGCCTATGCTGCTGCATCACTGAAAGCTGGCTCGTATGCTTATCCAGGAATGAGGCCTACAAGGTTCACTGGCAATCAAATAATCATGTCTCTTGGACATACGATTGAACATGAAGAGATGCTCGAAGTTATCCGGCTTGAAGGTCATTCTCTTGCTCAAGAAGATGGTTTTGCTTCTAGGGACGTTCATCTTTTACAGTTATGTAGTGGAATTGATGAGAATGCTGTGGGGGCTTGTTGTGAGCTCATATTTGCTCCAATTGATGAAATGTTCCCAGATGATGCTCCATTGGTTCCTTCCGGTTTCCGCATTATCCCATTGGATTCAAAACCAGGTGATAAAAATTATACACTGACAACAAATCGAACCCTGGATTTGACATCTGGTCTTGAAGTTGGCCCAGCAACAAATGCTGCAGGAGATGCATCATCATGTCATAACTATCGGTCGGTGTTGACTATTGCCTTCCAGTTTCCTTTTGACAGCAGTTTGCAGGATAATGTTGCAGTTATGGCACGTCAGTATGTCCGAAGTGTGATTTCCTCTGTCCAGAGGGTTGCCATGGCTATATCTCCATCTGGTATAAACCCAGGTGTCGGATCAAAACTCTCTCCTGGCTCTCCAGAAGCTCTTACACTAGCTAACTGGGTCTGCCACAGTTATAGTTATTATTTGGGGACGGATTTGCTGAGATCTGATTCTCTTGGTGGTGACTTGGTGCTCAAACATTTGTGGCATTATCAGGATGCCATTTTGTGCTGTTCTTTGAAATCGCAGCCCGTGTTCATCTTTGCAAACCAGGCTGGCCTTGACATGTTGGAGACAACTCTAGTGGCTTTACAAGACATTACATTGGATAAAATATTTGACGAGTCAGGCCGCAAGGCATTGTTAGCAGATTTTGCCAAGTTAATGCAGCAGGGCTTTGCTTATATGCCAGCTGGGATCTGCATGTCCACAATGGGCCGACATGTGTCATATGAGCAGGCCATTGCATGGAAAGTTCATGCTGAAGAAGATAGTAACAGTGTTCATTGTTTAGCTTTCTCTTTCATGAATTGGTCTTTTGTATGA 2538 0.4622 MAMAVAQHRESSSSGSIDKHLDSGKYVRYTAEQVEALERVYVECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVSENGYMRQQLHTLQPSAVATDASGDSVVTTPQQSMRDANNPAGFLAIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRTSWFRDCRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTTLENESLVVCERSLSGSGAGPNAAAAAQFVRAEMHPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSVLNCDGAEDVIIAVNSTKNLSGTSNPASSLSFLGGILCAKASMLLQNIPPPVLVRFLREHRSEWADFNVDAYAAASLKAGSYAYPGMRPTRFTGNQIIMSLGHTIEHEEMLEVIRLEGHSLAQEDGFASRDVHLLQLCSGIDENAVGACCELIFAPIDEMFPDDAPLVPSGFRIIPLDSKPGDKNYTLTTNRTLDLTSGLEVGPATNAAGDASSCHNYRSVLTIAFQFPFDSSLQDNVAVMARQYVRSVISSVQRVAMAISPSGINPGVGSKLSPGSPEALTLANWVCHSYSYYLGTDLLRSDSLGGDLVLKHLWHYQDAILCCSLKSQPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALLADFAKLMQQGFAYMPAGICMSTMGRHVSYEQAIAWKVHAEEDSNSVHCLAFSFMNWSFV* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1609 845 ProSiteProfiles START domain profile. 156 384 IPR002913 GO:0008289
Dod10g1609 845 Gene3D - 200 382 IPR023393 -
Dod10g1609 845 SUPERFAMILY Homeodomain-like 24 87 IPR009057 -
Dod10g1609 845 Gene3D - 18 91 - -
Dod10g1609 845 Pfam START domain 166 373 IPR002913 GO:0008289
Dod10g1609 845 SMART HOX_1 22 88 IPR001356 GO:0003677
Dod10g1609 845 SMART START_1 165 375 IPR002913 GO:0008289
Dod10g1609 845 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677
Dod10g1609 845 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 845 IPR044830 GO:0003700
Dod10g1609 845 Coils Coil 94 121 - -
Dod10g1609 845 CDD bZIP 77 116 - -
Dod10g1609 845 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 845 - -
Dod10g1609 845 CDD START_ArGLABRA2_like 160 376 - -
Dod10g1609 845 CDD homeodomain 25 85 IPR001356 GO:0003677
Dod10g1609 845 Pfam MEKHLA domain 700 844 IPR013978 -
Dod10g1609 845 Pfam Homeodomain 25 83 IPR001356 GO:0003677
Dod10g1609 845 SUPERFAMILY Bet v1-like 166 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1609 Dod-Chr10 37044096 37049726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1609 1 845 Homeobox Transcription Factor Family AT5G60690 82.256 0.0 1436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod10g1609 START 1.2e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1609 K09338 - gmx:100804870 1512.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1609 10 37044096 37049726 Dod10g1609 10 37044096 37049726 ECH
Dod10g1609 10 37044096 37049726 Dod03g2792 03 59781658 59788637 ECH