Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1599 ATGGAGTCTCAACTCAAAGTTGCTGCTGTTCTTGTTATTAGCATGCTCTGGATTCAGTACTCATTTTGTGATGAACCTTCTGATACTGGCCTAAACAAGTGGAAATGTATATGTTCTTCATTCCAAGGGAACCAGAAATTTTCTCTTGCTAATTGTTCTCAGTCATGTGATTGCCACTCAGATGCTGAAGAGAGTGAATCCACATGGACATGCACATGCAATCCCAATGGATTTCCTAAAGTGGCAGCAGATGGTCATAGTCCTAGTTGCTTTAAAACCTGCAACTGCACCTGGGGAACTGTCAGCATGCCACCAGGTTCAAAGAAACACATTTCGAGCAAGGCTGTAGTAGTTATTCTCTTAATATGTGTTATATGCACAACTCTTGCATTTCTTGCCTCAGTTATATACTATGTTTGCCGAAGGAACAGTTGTCCTATTCAATCAACAATGATCTCATCGGATAAGGAAACAAGTTACAGTAGTACCTCCAACTTAATTAGTCATAGGTCATCTTCATTGATAGAAACAAAAGTCACTATAAATTCTCCAGTTAGTCATATTACAGGATGCTTCCAGAGGGCCTCTTTCTTGTATGGGAGCCAGAGAGAAACTTTTCATGGAAATATTATTCAATTTTCATATGCTGAACTGGAAAATGCCACTGATAACTTCTTAACTTCCAACCTAATTGGGTTAGGTGGAAGTAGCTATGTATATCGTGGCCGGCTTAAAGATGGCAGTAATGTGGCTGTTAAGCGACTAAAAGATCAAGGAGGGCTTGAAGCAGATTCTGAATTTTTTACAGAGATTGAACTATTGTCTAGACTTCATCATTGTCATCTGGTGCCATTGATTGGATACTGCTCAGAATTAAAAGGGAAACATGTTCAGAGGCTACTAGTGTTTGAGTACATGCCTAATGGCAATTTGAGGGACCGTTTAGATGGAGTGTTTGGAAAAAACATGGATTGGGCTACTCGTGTAACTATTGCATTAGGAGCTGCAAGGGGTTTGGAATATCTTCATGATGCAGCTGCTCCAAGAATTCTGCACAGAGATGTCAAATCAACTAACATTCTTCTAGATGAAAATTGGCAAGCAAAGATAACTGATCTTGGTATGGCTAAAAACCTGAGAGCCGATGATCTTCCCAGCTATCCTGACTCACCAGCAAGAATGCAGGGGACATTTGGCTACTTTGCACCCGAGTATGCAATCGTTGGGAAAGCTTCTCTTGAGTCAGATGTATTCAGCTTTGGAGTGGTTCTTCTTGAGCTTATCAGCGGTCGGCAAGCCATCCTTAAGTCTTCAGGCAAAGAAGAGAGCCTTGTTATATGGGCCACTCCTCGCTTACAAGATAGTAGACAAGTAATAGCCGAGTTAGCTGATCCACGACTGAAAGGAAACTTCCCAATAGCAGAGGTGCAGATAATGGCATACTTAGCAAAGGAGTGTTTGCTGTTGGATCCTGACACTCGACCAACCATGAGTGAGGTTGTTCAAATTCTTTCAAGTATCTCCCCAGGCAAATCTAGGAGGAGAAGAAACATTCCAGTGAGCCGTTTTCAGGACTCAGAAGACTCCCAGAAGCAAATACAGGTTTCATTGACTAGAAGATTTCCTGCTGATAATTTATTGCCACAAGATCTTGACCGCGGTCTTCATGTTGAGAACGATAATGAAGATGTAGATACATTTTCAACTGAGTATATGGAGAGTTTGATGGTATTGACTTCAAAAGCTGAGAGCTGGGATGCATCAGAAGAGGAAATGGTAGACCTAACTGAGCCTCGGTTTGAATCATTTTGCATGACTAACATCCACTTTCCTTGA 1836 0.4139 MESQLKVAAVLVISMLWIQYSFCDEPSDTGLNKWKCICSSFQGNQKFSLANCSQSCDCHSDAEESESTWTCTCNPNGFPKVAADGHSPSCFKTCNCTWGTVSMPPGSKKHISSKAVVVILLICVICTTLAFLASVIYYVCRRNSCPIQSTMISSDKETSYSSTSNLISHRSSSLIETKVTINSPVSHITGCFQRASFLYGSQRETFHGNIIQFSYAELENATDNFLTSNLIGLGGSSYVYRGRLKDGSNVAVKRLKDQGGLEADSEFFTEIELLSRLHHCHLVPLIGYCSELKGKHVQRLLVFEYMPNGNLRDRLDGVFGKNMDWATRVTIALGAARGLEYLHDAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLRADDLPSYPDSPARMQGTFGYFAPEYAIVGKASLESDVFSFGVVLLELISGRQAILKSSGKEESLVIWATPRLQDSRQVIAELADPRLKGNFPIAEVQIMAYLAKECLLLDPDTRPTMSEVVQILSSISPGKSRRRRNIPVSRFQDSEDSQKQIQVSLTRRFPADNLLPQDLDRGLHVENDNEDVDTFSTEYMESLMVLTSKAESWDASEEEMVDLTEPRFESFCMTNIHFP* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1599 611 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 605 - -
Dod10g1599 611 ProSiteProfiles Protein kinase domain profile. 225 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1599 611 SUPERFAMILY Protein kinase-like (PK-like) 205 504 IPR011009 -
Dod10g1599 611 PANTHER OS01G0253100 PROTEIN 2 605 IPR045271 GO:0004714|GO:0006468
Dod10g1599 611 Pfam Protein kinase domain 228 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1599 611 CDD STKc_IRAK 231 507 - -
Dod10g1599 611 SMART serkin_6 225 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1599 611 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Dod10g1599 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Dod10g1599 611 Gene3D Phosphorylase Kinase; domain 1 199 305 - -
Dod10g1599 611 Gene3D Transferase(Phosphotransferase) domain 1 306 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1599 Dod-Chr10 36890149 36895480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1599 1 608 Receptor kinase-like Gene Family AT2G28250 51.144 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Dod10g1599 Pkinase 5.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1599 - - gmx:100499641 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1599 10 36890149 36895480 Dod10g1599 10 36890149 36895480 ECH
Dod10g1599 10 36890149 36895480 Dod03g2775 03 59532947 59540178 PCT