Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1595 ATGAGTAGCTTGAGGCCTGAGTCTCATGTAGCACAGCAAATTCGGCGTGATAAATTGAGAGTCCAGAACAACAGTTCACAGGAATTCCCCAACAATCTGGAACAATTGTCTTCCTCACACAACTTGGATCTCCTTCAAGTAAGGAATGTTAGAAATGCCAACATGCTTGATGAGCCTGTTCTTTATTCATCATCAGAAGTGCCCAATTTCTCAACCGCTTTGAACCCTTTGTCTGCTCCAAGGAACACATTATTGGAGTATCATCAGGAACAAGTAGGTGCTGCAGCTGAACCTAGTAGGCTAATGATGCATCAGTATGGTAATTCATTTCATTCTTCTCCGAAGGGACAAACTGAACTGCGCAATCTGGGATTTTGGAGGATTAATAGTGGTGCTTCCAATCAAGGGTGTGATTGGTTTGTAAATTATGCTAGCAGTTCTACGGCCAATAACGAAAGCAATAACCCCAATACTACTCTTTTGGCTTCTCAGCTAAACAATGTGTCTTATAACCAACACTACCTGAAGCCCAGTTACAATGAACTCACAGATGTACAATCTTCTCTTAACGGTTCATCTGATGTAACGGCTAATAGAGAAATTCAGAAGCATTTGGGTGGATTGCATCATCACCATTCTTCTGGATCATCATCTACACTGTATCAAAATGCTTTGCAGGATATTGTCAAGTCAGCTTCTATTAGTGCCCAAGGATCAGAGAACATGGCTTCACTTATACAGCAGCAAACTGGTCATGGGATTTGGGTTGGGGATGCTAGTGAACTTGAGCTTCTTCATCCAAGCTATGTTAACCAACCCAATCATCTGCGTTGTGGGAGTGGTAATCCATGGACTAATCGAACGGTTGACAACGCCATTCGCTGGAGTAGTCCACTTGGTCTCACAGACAAGAAGGTTGATGAACACTCTGGGCCTCACATGAGTGATTCAAATCCTCAGAGCTTGTCCTTATCACTGTCATCAAATGCACAATCAAAGACTTCTGTTTCTCAGTTTGAAGAAGGGTCTGCATCTGATGACCTTCAATCTGGATGTGGTGTGTCCAAGGATCCCCAATATATGAAGTATGTGAAATCTTTCATCAAACCTCAAGACACAATGGGGGTCCCTTCAAGCACTAGTTATAAGAATGTGGGTCCCCTTGGCCCTTTCACTGGGTATGCCACTATTCTTAAGAGTTCAAGGTTCTTAAACACTGCACAACAGTTGTTGGATGAGTTCTGTTGTATATCTAGTCCAAAATCGTCAAAAGCATGTGAAGTTTCAGAAAGGGTGTCTGGAGAAGCTAGTCCTTCTGCTTCTGCTGATGCTGTCACTGTCAATGAAGCTGAGATTGCTGCAAAAGGAGGTAGTAATTCAGGTTCTTCATCCTCCATGTTCTATAGTGCAAATGAAAATAATGCTGATTGGGGAATTGGGAGTGGCTCTTATATTTCTTCTCCGCCAGATTATCAACAGAAGAAAGCAAGACTACTGTTCATGCAAGAGGAGGTTACCAGGAGATACAAGCAGTACCATCAACAAATGCAGATGGTTGTTTCGTCCTTTGAGTCAGTAGCAGGTCTTAGTTCCGCCACACCTTACGTCTCCTTGGCTCTCAAGTCGGTATCCCAACACTTCAGATGCCTGAAAAATTCCATCTCTGATCAGCTCAAGCATATAAGTGAAGTCTTGGGTGAGGATTCCTCAGTACCCTCCACAAGTACTTGTAGTAATGTTGACACTAACATGGGAAGGCTAAGGAGCATGGACCAAAGCTTTCAAAAGAACAAACCTGGGAGGGGTAGCGCTAGCCTAGTTGAACCCCAGCAGCATGTGTGGAGGCCCCAGAGAGGCTTGCCGGAACGTGCAGTTGCAATTCTTAAAGCTTGGTTATTCGAGCATTTTCTTCACCCTTACCCCACAGACACTGATAAACACATGTTGGCTACTCAAACAGGTCTTTCACGAAACCAGGTGTCAAATTGGTTCATAAATGCTCGAGTCCGGGTGTGGAAGCCAATGGTTGAGGAAATACACACGCTTGAGACAAAAGGCACAACAAGTGCCAATCAGAACTCCACAAGAGAGAATGAAGGAAATAATTGTGGCACTGAAGATGGTACCAGCCGACAGCCTAAAGTGGATAAGCCTGTAAGCAAATTTGGCATGCATTCAATCCCTGAAAACCAATCTCATCAGTATGGGGAGAATGTGTTGAATAATGCAGAACAATGGAGCCAAGAGAAGAGGTCAAAATTGGAATGCCAGATGAGTTCAAGCATAGATGATGGGTCATTGATGGGTTTTGTCCCGTACAGACGTGGTGGGCTTGAGGTCGGTGGGCTTGGATCGGTGTCACTAACGTTGGGCCTCAGGCATGGGGTTGACGGTGTACAAAGCCAACAACAACAGCACTTACAAGAGGAGCAGCTTAGGCATCACTTTGGAGGTCACATGATCCATGATTTTGTAGGCTGA 2481 0.443 MSSLRPESHVAQQIRRDKLRVQNNSSQEFPNNLEQLSSSHNLDLLQVRNVRNANMLDEPVLYSSSEVPNFSTALNPLSAPRNTLLEYHQEQVGAAAEPSRLMMHQYGNSFHSSPKGQTELRNLGFWRINSGASNQGCDWFVNYASSSTANNESNNPNTTLLASQLNNVSYNQHYLKPSYNELTDVQSSLNGSSDVTANREIQKHLGGLHHHHSSGSSSTLYQNALQDIVKSASISAQGSENMASLIQQQTGHGIWVGDASELELLHPSYVNQPNHLRCGSGNPWTNRTVDNAIRWSSPLGLTDKKVDEHSGPHMSDSNPQSLSLSLSSNAQSKTSVSQFEEGSASDDLQSGCGVSKDPQYMKYVKSFIKPQDTMGVPSSTSYKNVGPLGPFTGYATILKSSRFLNTAQQLLDEFCCISSPKSSKACEVSERVSGEASPSASADAVTVNEAEIAAKGGSNSGSSSSMFYSANENNADWGIGSGSYISSPPDYQQKKARLLFMQEEVTRRYKQYHQQMQMVVSSFESVAGLSSATPYVSLALKSVSQHFRCLKNSISDQLKHISEVLGEDSSVPSTSTCSNVDTNMGRLRSMDQSFQKNKPGRGSASLVEPQQHVWRPQRGLPERAVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHTLETKGTTSANQNSTRENEGNNCGTEDGTSRQPKVDKPVSKFGMHSIPENQSHQYGENVLNNAEQWSQEKRSKLECQMSSSIDDGSLMGFVPYRRGGLEVGGLGSVSLTLGLRHGVDGVQSQQQQHLQEEQLRHHFGGHMIHDFVG* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1595 826 Pfam Associated with HOX 397 555 IPR006563 -
Dod10g1595 826 ProSiteProfiles 'Homeobox' domain profile. 611 674 IPR001356 GO:0003677
Dod10g1595 826 SUPERFAMILY Homeodomain-like 616 681 IPR009057 -
Dod10g1595 826 MobiDBLite consensus disorder prediction 684 715 - -
Dod10g1595 826 SMART prehox3 392 556 IPR006563 -
Dod10g1595 826 Pfam Homeobox KN domain 631 670 IPR008422 GO:0003677|GO:0006355
Dod10g1595 826 MobiDBLite consensus disorder prediction 302 327 - -
Dod10g1595 826 MobiDBLite consensus disorder prediction 684 709 - -
Dod10g1595 826 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 28 796 - -
Dod10g1595 826 SMART HOX_1 614 678 IPR001356 GO:0003677
Dod10g1595 826 Gene3D - 617 679 - -
Dod10g1595 826 MobiDBLite consensus disorder prediction 313 327 - -
Dod10g1595 826 CDD homeodomain 614 675 IPR001356 GO:0003677
Dod10g1595 826 MobiDBLite consensus disorder prediction 333 352 - -
Dod10g1595 826 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 28 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1595 Dod-Chr10 36792257 36798539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1595 398 799 Homeobox Transcription Factor Family AT4G34610 35.627 9.61e-66 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Dod10g1595 POX 3.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1595 - - adu:107461750 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1595 10 36792257 36798539 Dod10g1595 10 36792257 36798539 ECH
Dod10g1595 10 36792257 36798539 Dod03g2763 03 59383006 59389672 PCT