Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1592 ATGTGTAAGACCAAAATGGCGACTAACGCCGCCAGCCCAACGTCAAGCCCACGGGCCAATCGAACTACGGGCTCACGCTCTAACTCCCGGCGCAGAACCCAAACCCACAGGCCCACCTCCGCCCCTTCGCCCTCGGCCCCACCTGCAACCACCAACTCGTTCTCGGATCCTCCCGCCTCAACCTCCTACAGCACAGGCTCCACCACCGGCTACCGCCTCTCCACCGACACCTCCATCTCCAGCCGCACCTCCCTCACCTCACTCCGCTCCAGCCTGCCGGAGAACCCCAACATCTACGACTTCTCCGAAATCTGCAGCGCCACCAACAACTTCCTCGCGAGACGCTTCTCCTCCTCCTCCTCCTCCACCCCTTCGTGGCGGTGCAAGCTTCGCGGCGCCGACGTCATCGTGTTCCAGCGGAAGTTTCGCCGGAAGCTCGAGACTTCGCAGCTCCGGCAGCGGCTTTCGGTGATCTGCCGGAGCCACCACTTCAGCATCATCAAACTACTCGGCGCGTCGATCTCCGGCGACCACATTTACCTCGTCTATGACTTCATTGACGGCGGAGCGAACCTCTCCGATTGTCTCCGAAACTCGAAGAACCTCAACTTCACGGTGCTGTCCACGTGGCTCTCGAGAATGCAGGTGGCTACCGACGTCGCTCACGGACTCGATTACGTTCACAATAAGACCGGATTGAGCATCAATTTCGTGCACAATCACATCAAGAGCAGCGCGATTATCGTCACGGAACCTAATTTCAACGCTAGGGTTTGCCATTTCGGCGCCGCGCAGCTCTGCGGCGAGATCCAGGAAGAAGAGAGCGAGAGCGCCGCGGAGAAATTGGGGGAAATCGAAGAGGAACCCTCGGGTTCGCCGTCGCCGGCGAGATCCGAGAACTTGAAGCGATCGGGGAGGTCCAACCCGCAATTCGAGGGCGTACGGGGTTACATGTCGCCGGAATTTCGGGCCACCGGCGTGGCTACGCAGAAGTCCGACGTGTACGCGTTCGGAGTGGTGATACTGGAGCTGCTGTCCGGGGAGGAGCCGTTGAAGTTCAAGTACGACAGGAAGAGCGGCGATTTCGTGAGGACGTCGGTAATCGAGGCCGCGAGGGCCGCCGTGGACGGCGGGGAGGGGAGGCTGAGGAGGTGGGTGGATCGGAGGATGAAGGATTCGTTTCCGGTTGAGGTCGCGGAGAAGGTGACACGTGTCGCGTTGGAGTGCGTACACTTGGACGCTGATAAGAGGCCCAAGATGGGACGCGTTGCTGACAAGATATCGAAGCTGTATCTGGAATCGAAGATTTGGTCTGATAACATTACGATGCCCACTGATATTTCTGTTTCTTTGGCTCCTCGATGA 1365 0.5919 MCKTKMATNAASPTSSPRANRTTGSRSNSRRRTQTHRPTSAPSPSAPPATTNSFSDPPASTSYSTGSTTGYRLSTDTSISSRTSLTSLRSSLPENPNIYDFSEICSATNNFLARRFSSSSSSTPSWRCKLRGADVIVFQRKFRRKLETSQLRQRLSVICRSHHFSIIKLLGASISGDHIYLVYDFIDGGANLSDCLRNSKNLNFTVLSTWLSRMQVATDVAHGLDYVHNKTGLSINFVHNHIKSSAIIVTEPNFNARVCHFGAAQLCGEIQEEESESAAEKLGEIEEEPSGSPSPARSENLKRSGRSNPQFEGVRGYMSPEFRATGVATQKSDVYAFGVVILELLSGEEPLKFKYDRKSGDFVRTSVIEAARAAVDGGEGRLRRWVDRRMKDSFPVEVAEKVTRVALECVHLDADKRPKMGRVADKISKLYLESKIWSDNITMPTDISVSLAPR* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1592 454 ProSiteProfiles Protein kinase domain profile. 111 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1592 454 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 454 - -
Dod10g1592 454 MobiDBLite consensus disorder prediction 277 314 - -
Dod10g1592 454 Gene3D Phosphorylase Kinase; domain 1 72 185 - -
Dod10g1592 454 PANTHER OS09G0572100 PROTEIN 1 454 - -
Dod10g1592 454 Pfam Protein kinase domain 143 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1592 454 MobiDBLite consensus disorder prediction 293 307 - -
Dod10g1592 454 Gene3D Transferase(Phosphotransferase) domain 1 189 443 - -
Dod10g1592 454 MobiDBLite consensus disorder prediction 1 76 - -
Dod10g1592 454 SUPERFAMILY Protein kinase-like (PK-like) 92 427 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1592 Dod-Chr10 36748332 36750522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1592 94 437 Receptor kinase-like Gene Family AT1G51940 28.490 1.05e-35 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dod10g1592 Pkinase 3.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1592 - - adu:107461746 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1592 10 36748332 36750522 Dod10g1592 10 36748332 36750522 ECH