Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1591 ATGGCTTCTTCTTCAGTTAAGAATAAGAGTGTGAGTAGTGTTGTCCGTGGTGGTGGTTCTTCTTCTGCATTGTCCATCCAAAACGTAAGTACTACTGCAGCGGCGGCGCCGGCCATGAGGCGCAGGCCACCTAGTAGCAAACACGGCAGGAGGGACCGCCACATCAAGGTTGAGGGGAGAGACCGCCGCGTCCGGATGTCCGCAGATTGTGCCCTCCGCGTCTTCGAGCTCACGAGCGAGCTCGGCACAAATACTAATGGCGAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCAGCCATCATAGCCACCACCGGCCGCGGCGTTCCGCCCACCATTGGCAACCAAGTGGGGGCACGTGCCCAGCCTGTTCCTCCTACTGCTGCTGCTGCTGAAGCTGGTGTTGTTGTTGCAGCACCGCCTCCACCGGGGGAAGACAACAACAACAACAACGTTGTTGTTGAGCATGACGATGTTTTGTTCGACATTGATGAGTTAGTGAGTGCAAATGAAAATGTTGTGTTCCCAAACTTTGAGAATATGGATTTTCTTCAGAACAATGGCTGGGGCCTTTGA 576 0.5521 MASSSVKNKSVSSVVRGGGSSSALSIQNVSTTAAAAPAMRRRPPSSKHGRRDRHIKVEGRDRRVRMSADCALRVFELTSELGTNTNGETIEWLLRQAEPAIIATTGRGVPPTIGNQVGARAQPVPPTAAAAEAGVVVAAPPPPGEDNNNNNVVVEHDDVLFDIDELVSANENVVFPNFENMDFLQNNGWGL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1591 191 ProSiteProfiles TCP domain profile. 50 104 IPR017887 -
Dod10g1591 191 MobiDBLite consensus disorder prediction 1 54 - -
Dod10g1591 191 MobiDBLite consensus disorder prediction 1 34 - -
Dod10g1591 191 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 24 127 - -
Dod10g1591 191 Pfam TCP family transcription factor 49 109 IPR017887 -
Dod10g1591 191 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 127 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1591 Dod-Chr10 36744753 36745675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1591 41 111 TCP Transcription Factor Family AT1G69690 61.972 8.37e-26 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod10g1591 TCP 9.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1591 - - aip:107610427 105.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1591 10 36744753 36745675 Dod03g2759 03 59334083 59334601 PCT