Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1587 ATGGCTGAGAATATTGAGGGGTCACCAGGAAGCTCCATGCATGGAGTAACTGGCAAGGAACAGACCTTTGTGGCCTCAGTTTCTTCCCCAGTGGTGCCAACTGATACCACAGCCAAATTTGCCCTCCCTGTTGATTCAGAACACAAGGCCAAGGTGTTCAAACTCTTCTCCTTAGCCAATCCCCACATGAGAACCTTCCACCTATCTTGGATTTCCTTCTTCACCTGCTTTGTTTCAACCTTTGCAGCAGCCCCTCTTGTCCCCATAATCCGTGACAACCTTAACCTCACAAAAAGTGACATTGGAAATGCTGGGGTTGCTTCTGTCTCTGGGAGCATTTTCTCCAGGCTTGCAATGGGTGCAGTGTGTGATCTATTAGGCCCACGTTATGGATGTGCATTCCTTATCATGCTCTCTGCCCCAACAGTGTTCTGCATGTCATTTGTGAAAGATGCTGCTGGTTACATAGTGGTTAGGTTCTTGATTGGCTTCTCCTTGGCCACTTTTGTTTCATGCCAATACTGGATGAGCACAATGTTCAATAGTAAGATTATAGGGCTTGCAAATGGGACAGCAGCTGGGTGGGGGAACATGGGTGGTGGGGCCACTCAGCTCATAATGCCATTGGTGTATGAATTGATCAGGAGAGCTGGGGCTACTCCCTTCACTGCATGGAGAATTGCGTTTTTCATTCCTGGTTGGTTGCATGTGATCATGGGGATCCTGGTCTTAACACTAGGCCAAGACTTGCCAGATGGAAACCTTGGTGCCTTACAGAAGAAGGGTAATGTTAATAAAGACAAGTTCTCCAAGGTGCTATGGTATGCCATAACAAACTACAGGACATGGATTTTTGCCCTCCTTTACGGATACTCTATGGGAGTTGAATTAACCACTGACAATGTCATTGCTGAGTATTTCTATGACAGGTTTAATCTCAAGTTACACACTGCTGGAATCATTGCTGCATCATTTGGAATGGCAAACATAGTTGCACGCCCCTTTGGTGGATTTGCTTCTGATTTTACAGCCAGGATATTTGGCATGAGGGGTAGACTCTGGACCCTCTGGATCCTCCAAACATTAGGAGGGGTTTTCTGTATATGGCTTGGCCGTGCCAATTCACTTCCTATTGCTGTTTTGGCCATGATCCTCTTCTCTATGGGAGCTCAAGCTGCATGTGGTGCAACATTTGGCGTCATTCCATTCATCTCTAGAAGGTCTCTTGGGATCATATCAGGGCTAACTGGTGCAGGTGGAAACTTTGGTTCTGGCTTGACCCAATTGGTTTTCTTTTCAACCTCCAAGTTCTCAACATCCGCAGGACTCTCCTGGATGGGTGCCATGATTGTGTGTTGCACACTTCCTGTGACCCTTGTTCACTTCCCACAGTGGGGTGGCATGTTCCTACCACCCTCAAGGGATGTGACCAAATCTACTGAAGAGTACTACTACACTTCTGAATGGAATGAGGAGGAGATGCAGAAAGGGTTGCACCAGCAAAGCCTCAAGTTTGCTGAAAATAGCCGCTCTGAGAGAGGAAAGCGTGTGGCATCCGCACCAACACCCGCAAATGCAACTCCAACTCATGTCTAA 1596 0.4724 MAENIEGSPGSSMHGVTGKEQTFVASVSSPVVPTDTTAKFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVASVSGSIFSRLAMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVKDAAGYIVVRFLIGFSLATFVSCQYWMSTMFNSKIIGLANGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRIAFFIPGWLHVIMGILVLTLGQDLPDGNLGALQKKGNVNKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAASFGMANIVARPFGGFASDFTARIFGMRGRLWTLWILQTLGGVFCIWLGRANSLPIAVLAMILFSMGAQAACGATFGVIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSKFSTSAGLSWMGAMIVCCTLPVTLVHFPQWGGMFLPPSRDVTKSTEEYYYTSEWNEEEMQKGLHQQSLKFAENSRSERGKRVASAPTPANATPTHV* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1587 531 Gene3D MFS general substrate transporter like domains 59 254 IPR036259 -
Dod10g1587 531 Pfam Major Facilitator Superfamily 70 426 IPR011701 GO:0022857|GO:0055085
Dod10g1587 531 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 528 - -
Dod10g1587 531 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 528 IPR044772 GO:0015112
Dod10g1587 531 SUPERFAMILY MFS general substrate transporter 60 460 IPR036259 -
Dod10g1587 531 CDD MFS_NRT2_like 66 459 IPR044772 GO:0015112
Dod10g1587 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 65 459 IPR020846 GO:0022857
Dod10g1587 531 Gene3D MFS general substrate transporter like domains 265 466 IPR036259 -
Dod10g1587 531 MobiDBLite consensus disorder prediction 499 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1587 Dod-Chr10 36650186 36652475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1587 7 531 Inorganic Solute Cotransporters AT5G60770 80.381 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1587 K02575 - gmx:547946 982.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1587 10 36650186 36652475 Dod03g2753 03 59228056 59230189 PCT