Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1582 ATGGTGTCCGACGCGAGCAAGAAGAAGGCCGCGCAGAAGAAGGCTGCGGCGGCGGCCAAGAGAGGTGGCAAGGCAGCCGCCGCCGCAGCTTCGTCGAAGGCGTCGGCGTCGGAGAAGGCCGCCGACAAGCTCGCCGACGGGATCGGAGATCTTCAGATATCGGATCGGACCTGCACCGGCGTCCTATGCTCTCATCCCCTTTCCAGGGATATTAGGATAGAGTCTCTGTCAGTTACTTTCCATGGACATGATCTGATAGTTGATTCTGAATTGGAGCTCAACTATGGAAGACGTTATGGTTTGCTTGGATTAAATGGCTGTGGAAAATCTACCCTGCTCACAGCAATTGGTTTGCGGGAGCTTCCTATTCCCGAACACATGGATATTTATCACCTTACCAGGGAAATTGAGGCCTCTGACATGTCTGCATTGGAGGCTGTCATAAGCTGTGACGAGGAAAGGTTGAGATTGGAGAAAGAAGCTGAAGCATTGGGTTCACAGGATGATGGCGGTGGTGAAGCTCTTGAGCGTATTTATGAACGATTGGAAGCTATGGATGCATCAACTGCTGAAAAACGTGCTGCTGAAATCTTATTTGGTCTTGGATTCAACAAGCAGATGCAGGCAAAAAAGACACGTGATTTTTCTGGTGGCTGGAGAATGAGGATTGCTTTAGCACGAGCTTTATTTATGAACCCAACCATTCTTCTACTTGATGAACCAACCAATCACCTCGATTTGGAAGCTTGTGTGTGGCTGGAGGAGAACTTGAAGAAGTTTGATCGTATTCTGGTTGTGATTTCGCACTCCCAGGATTTCCTTAATGGTGTCTGCACAAATATCATCCACATGCAAAACAAAAAGCTGAAGATCTACACTGGTAATTATGATCAATATGTTCAGACACGTGCTGAACTTGAAGAGAATCAGATGAAACAGTACAAATGGGAGCAGGAGCAGATTGCCTCGATGAAGGAATACATTGCCCGATTTGGCCATGGATCAGCAAAACTAGCTCGCCAAGCTCAGAGTAAAGAAAAAACTCTTGCAAAAATGGAGCGGGGTGGACTTACAGAGAAGGTGGTAAGGGACAAAGTTTTGGTATTCCGCTTTGTAGATGTGGGGAAACTTCCCCCTCCTGTCCTCCAGTTTGTTGAGGTGACATTTGGTTACACTCCTGACAACCTCATATATAAGAACATTGACTTTGGGGTTGATTTAGACTCTAGGATTGCTCTGGTTGGACCCAATGGAGCTGGGAAGAGTACATTACTGAAGTTAATGACCGGTGATTTGGTCCCTATAGATGGCATGGTTCGACGCCATAATCATCTTCGAATTGCACAGTTTCACCAGCACCTGGCTGAAAAGCTGGACTTGGAAGTGTCTGCACTCCAGTATATGATGAAAGAATACCCTGGAAATGAGGAAGAGAGGATGAGAGCAGCTATTGGGAAGTTTGGACTTTCGGGAAAAGCCCAGGTGATGCCTATGATGAATTTGTCTGATGGGCAGAGGAGCCGTGTGATATTCGCTTGGTTAGCTTATAGACAGCCTCACTTGCTACTCTTGGATGAGCCTACTAACCATTTGGATATTGAAACAATTGACTCCTTGGCCGAGGCATTGAATGAATGGGATGGTGGCTTGGTGCTTGTTAGCCATGATTTTAGGCTCATTAATCAGGTAGCCCATGAGATATGGGTTTGTGCTGATCAAACTGTGACCAGATGGGAAGGTGATATTATGGATTTCAAGGAGCATCTTAGGGCAAAGGCAGGTTTATCTGACTGA 1794 0.466 MVSDASKKKAAQKKAAAAAKRGGKAAAAAASSKASASEKAADKLADGIGDLQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGLRELPIPEHMDIYHLTREIEASDMSALEAVISCDEERLRLEKEAEALGSQDDGGGEALERIYERLEAMDASTAEKRAAEILFGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVISHSQDFLNGVCTNIIHMQNKKLKIYTGNYDQYVQTRAELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDLDSRIALVGPNGAGKSTLLKLMTGDLVPIDGMVRRHNHLRIAQFHQHLAEKLDLEVSALQYMMKEYPGNEEERMRAAIGKFGLSGKAQVMPMMNLSDGQRSRVIFAWLAYRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCADQTVTRWEGDIMDFKEHLRAKAGLSD* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1582 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 365 576 IPR027417 -
Dod10g1582 597 CDD ABCF_EF-3 71 288 - -
Dod10g1582 597 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 71 311 IPR003439 GO:0005524
Dod10g1582 597 Pfam ABC transporter 398 529 IPR003439 GO:0005524
Dod10g1582 597 Gene3D - 71 335 IPR027417 -
Dod10g1582 597 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 382 597 IPR003439 GO:0005524
Dod10g1582 597 CDD ABCF_EF-3 382 574 - -
Dod10g1582 597 Pfam ABC transporter 282 358 IPR032781 -
Dod10g1582 597 Coils Coil 289 309 - -
Dod10g1582 597 ProSitePatterns ABC transporters family signature. 215 229 IPR017871 GO:0005524
Dod10g1582 597 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 597 - -
Dod10g1582 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 315 IPR027417 -
Dod10g1582 597 PANTHER - 1 597 - -
Dod10g1582 597 Gene3D - 351 595 IPR027417 -
Dod10g1582 597 SMART AAA_5 95 297 IPR003593 -
Dod10g1582 597 SMART AAA_5 407 595 IPR003593 -
Dod10g1582 597 Pfam ABC transporter 89 243 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1582 Dod-Chr10 36583865 36587793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1582 202 269 Calmodulin-binding Proteins AT2G36910 42.857 6.28e-08 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1582 10 36583865 36587793 Dod10g1582 10 36583865 36587793 ECH
Dod10g1582 10 36583865 36587793 Dod03g2743 03 59123815 59126455 PCT