Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1579 ATGCAGAGATCAGGTTACGGCTCCGACGGGATATACAGGTCACTGAGACCATCACTCTTCCTTCCCAACGACCCAAACCTCTCCCTTGTCTCCCACCTCTTCTCCAGAGCCTCCTCCTTCCCAAACAAACCCGCCCTCCACGACGCCGACACCTTCCAAACCCTCGCCTTCTCCGCCCTCAAGTCCCTCGTCATCAAATCCTCCCACGCCCTCCTCCGCCTCGGCATCTCCAAAAACGACGTCGTCCTCTTCCTCTCCCCCAACACCATCTACTACCCTCTCTGCTTCCTCGCCGTCACCGCCGTTGGCGCCGTCGCCTCCACCGTCAACCCTTCCTACACCCCCGCTGAGGTCTCCAAACAAATCAAAGACTGCAACCCAAAGCTCGTCATCACCGTCCCAGAATTATGGGACAAGGTGAAAGCCTTCAACCTCCAAACAGTCTTCCTCCCTTCGGATCCCACCGTCCACGTGTCGTCATCATCATCATCACCACCGGGTTCCAAGATCACGGGTTTCGACGAGTTTGTTAAACTGGGAGGTTCCCCGACAGAGCTTCCTCCTGGCAACGTGGGACAGAACGACACCGCGGCGCTGTTGTACTCTTCGGGGACCACGGGCGTGAGCAAGGGCGTGGTGCTCACGCACGGGAACTTCATCTCCGCGGCTACGATGATTTGCATGGATGATGAGCTGGCGGGGCGGTTACATGATGTGTTCCTCTGCGTGCTGCCCATGTTCCACGTGTTCGGATTGGCGGTTATATGCTACGCGCAGCTCCAGCGTGGGAACGCGATTGTGTGCTTGAAGAGGTTCGAGTTCGAGGTGGTGCTTAGGACCATTGAGAAGTATAAGGTCACGCACTTGTGGGTCGTGCCTCCCATCGTGCTTGCTCTTGCCAAACACGGCCTTGTTGACAAGTTTGATCTTTCGTCTTTGACTCATATTGGTTCCGGTGCTGCACCTCTCGGGAAAGAGTTGATGGAGGAGTGCTCCAAGCGTTTCCCTCATGCTTTGGTCTGTCAGGGCTATGGTATGACTGAGACATGTGGGATTGTTTCCGTGGAGAATCCGAGGGCTGGAGTACGGAATACTGGCTCTACAGGACTGCTAGTGTCGGGGGTGGAAGCTCATATAGTTAGTGTGGATACAGTGAAGCCCCTCCCTCCTGGACAGTTGGGGGAGATATGGGTGCGGGGTCCTAATATGATGAAAGGTTATCACAACAATCCACAGGCCACAAGATCAACTATAGACCAAAAAGGGTGGGTACATACAGGAGATCTTGGGTATTTTGATGAGGATGGGCACCTTTATGTTGTTGACCGTATCAAAGAACTAATTAAGTATAAAGGTTTTCAGGTTGCACCAGCAGAGCTTGAAGGCCTTCTTGTTTCTCACCCTGAAATACTTGATGCTGTTGTCATCCCGTATCCTGATGCTGAAGCTGGTGAGGTTCCAGTTGCCTATGTTGTTCGTTCGCCCAACAGTTCACTCACTGAGGAAGATGTTAAGAAGTTTGTTGCTAATCAGGTTGCACCTTTCAAAAGATTGAGAAGGGTGACATTCATCAACAGTGTTCCTAAGACAGCATCAGGAAAAATTCTCAGAAGAGAGCTTATTGAAAAAGCACGATCCAAAATATAA 1647 0.5216 MQRSGYGSDGIYRSLRPSLFLPNDPNLSLVSHLFSRASSFPNKPALHDADTFQTLAFSALKSLVIKSSHALLRLGISKNDVVLFLSPNTIYYPLCFLAVTAVGAVASTVNPSYTPAEVSKQIKDCNPKLVITVPELWDKVKAFNLQTVFLPSDPTVHVSSSSSSPPGSKITGFDEFVKLGGSPTELPPGNVGQNDTAALLYSSGTTGVSKGVVLTHGNFISAATMICMDDELAGRLHDVFLCVLPMFHVFGLAVICYAQLQRGNAIVCLKRFEFEVVLRTIEKYKVTHLWVVPPIVLALAKHGLVDKFDLSSLTHIGSGAAPLGKELMEECSKRFPHALVCQGYGMTETCGIVSVENPRAGVRNTGSTGLLVSGVEAHIVSVDTVKPLPPGQLGEIWVRGPNMMKGYHNNPQATRSTIDQKGWVHTGDLGYFDEDGHLYVVDRIKELIKYKGFQVAPAELEGLLVSHPEILDAVVIPYPDAEAGEVPVAYVVRSPNSSLTEEDVKKFVANQVAPFKRLRRVTFINSVPKTASGKILRRELIEKARSKI* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1579 548 Gene3D - 9 445 IPR042099 -
Dod10g1579 548 CDD 4CL 21 540 - -
Dod10g1579 548 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 547 - -
Dod10g1579 548 SUPERFAMILY Acetyl-CoA synthetase-like 19 546 - -
Dod10g1579 548 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 547 - -
Dod10g1579 548 Pfam AMP-binding enzyme 35 450 IPR000873 -
Dod10g1579 548 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Dod10g1579 548 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Dod10g1579 548 Gene3D - 446 547 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1579 Dod-Chr10 36517234 36521878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1579 1 548 Monolignol Biosynthesis Gene Families AT4G05160 67.636 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1579 K01904 - gmx:100797843 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1579 10 36517234 36521878 Dod03g2739 03 59099787 59103913 PCT