Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1558 ATGGGCGGTCAGATCCAGTATTCCGATAAGTACTTCGATGATACTTACGAGTATAGGCATGTGGTTCTGCCTCCTGAAGTCGCCAAACTGCTTCCCAAGAATCGCCTTCTCTCTGAAAATGAGTGGCGTGCAATTGGGGTTCAACAGAGTCGTGGGTGGGTTCATTATGCAATTCATCGCCCTGAGCCTCATATAATGCTCTTTAGGAGGCCTTTGAACTATCAGCAGCAGCAGCAGCAGGAAAATCAGGCTCAGCAACCCATGCTTGCCAAGTGA 276 0.4891 MGGQIQYSDKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQQQENQAQQPMLAK* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1558 91 Pfam Cyclin-dependent kinase regulatory subunit 5 71 IPR000789 GO:0016538
Dod10g1558 91 SUPERFAMILY Cell cycle regulatory proteins 3 84 IPR036858 GO:0016538
Dod10g1558 91 PRINTS Cyclin-dependent kinase regulatory subunit signature 41 55 IPR000789 GO:0016538
Dod10g1558 91 PRINTS Cyclin-dependent kinase regulatory subunit signature 56 70 IPR000789 GO:0016538
Dod10g1558 91 PRINTS Cyclin-dependent kinase regulatory subunit signature 4 18 IPR000789 GO:0016538
Dod10g1558 91 PRINTS Cyclin-dependent kinase regulatory subunit signature 19 33 IPR000789 GO:0016538
Dod10g1558 91 Gene3D - 1 85 IPR036858 GO:0016538
Dod10g1558 91 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 86 - -
Dod10g1558 91 SMART CKS_2 4 73 IPR000789 GO:0016538
Dod10g1558 91 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 7 25 IPR000789 GO:0016538
Dod10g1558 91 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1558 Dod-Chr10 36300057 36301820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1558 3 79 Core Cell Cycle Gene Families AT2G27970 93.506 1.99e-52 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1558 K02219 - sind:105169953 171.014