Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1556 ATGACTGCCTGCTGGAGTGCCCCTTTGGACATCTTGGAGGAAGCCGTTCAGAAGATCCTTGGTGGCTTCACGTTGAAGAAATCTAACATCTGTTTTAACTGCAGAGCTGGCAACGGTTTGTCAAGACTGCTAGTATGTGATTCATGCATGGAATTGAAAAACTCTCAGCCTAGCCCCCCTCAAACTACTGTGACTGTGCCAAGCATTAAAAGCGTTCCACTTCTAGTTCAACCCAGATCACCAGAACCAGTTGCAGTTCCAAAGTCACTAAACAATGGGATGAAGCATAGCACATCTCGTGGTAAGAGTCAAGGAAGACTAACTAGAAAGGATCTTCGCCTGCATAAGTTGGTCTTTGAGGAAGATGTGTTGGCGGATGGAACTGAATTAGCTTACTATGCTCATGGAAAGAAACTGTTGTTGGGTTACAAAAAGGGATTTGGAATTCTTTGTACCTGCTGCAGCTCTGAGGTCAGTGCTTCTCAGTTTGAAGCTCATGCTGGCTGGGCATCTCGACGCAAGCCTTACCTCCACATATACACATCTGATGGGGTCTCACTCCATGATTTGTCCATATCTTTATCAAAAGATCGGAGGTTTTCTACCAATGATAATGATGATCTCTGCAGCATTTGTGAAGATGGGGGGGATCTTTTGTGTTGTGATGGATGCCCAAGAGCTTTTCACATAGATTGTGTTCCTCTACCTTGCATTCCGAATTGGTACATGGTATTGTAA 738 0.4458 MTACWSAPLDILEEAVQKILGGFTLKKSNICFNCRAGNGLSRLLVCDSCMELKNSQPSPPQTTVTVPSIKSVPLLVQPRSPEPVAVPKSLNNGMKHSTSRGKSQGRLTRKDLRLHKLVFEEDVLADGTELAYYAHGKKLLLGYKKGFGILCTCCSSEVSASQFEAHAGWASRRKPYLHIYTSDGVSLHDLSISLSKDRRFSTNDNDDLCSICEDGGDLLCCDGCPRAFHIDCVPLPCIPNWYMVL* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1556 245 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 72 242 - -
Dod10g1556 245 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 2 62 - -
Dod10g1556 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 243 IPR013083 -
Dod10g1556 245 PANTHER AUTOIMMUNE REGULATOR 72 242 - -
Dod10g1556 245 PANTHER AUTOIMMUNE REGULATOR 2 62 - -
Dod10g1556 245 MobiDBLite consensus disorder prediction 85 106 - -
Dod10g1556 245 SUPERFAMILY FYVE/PHD zinc finger 196 239 IPR011011 -
Dod10g1556 245 Pfam Tify domain binding domain 142 190 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1556 Dod-Chr10 36293053 36296696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1556 106 242 PHD Transcription Factor Family AT2G36720 66.187 1.12e-58 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1556 - - lang:109351691 345.51