Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1550 ATGGCAATTGCAAATAAATCAACCTTAACAATGGAATGCATGGAAGTGCCACCATGGCTAGAACACCTACTGTCCACCACATTCTTCTCATTGTGTGAAGTGCACACAAATGCCCCAAGAAACGAACGCAAAATGTACTGCCTCGATTGCAGTGATCAATCATCTTGCATCCATTGCATAACATCTTCTCATAAAGGTCATCGTGTGATTCAAATAAGGAGGTCATCATATCAGGATGTTGTGAGGGTAGCTGAGATTCAAAAGGCTGTGGACATCACTGGGGTCCAGACATATGTGATCAATAGTGCTAGGATCATTTTCTTGAATACAAGAACTCCTACTAATTCTCAGCAAAATCCCAAAAGTTCTGGTAAAGTTAGTGTTAAAAACCACTATAAGTGTGTGGCCTGCACAAGAAATCTCGTGGACCATTGTCATTTCTGTTCTTTGGAATGCAAGATGGAGTGGACAAAGAAGATTGAGTGTGAAAGTTCTGCTACCGAAGGAATGCCAAGAAGGTTGCTATCACAGGAAGAAGAGGAAGAAGTGCACCAAAGGATCCTTGGAGGATTATATGGGCGCAGGCCTTCTCCTTCTACTGAGTCACCTCCAAAAGCTAGCTCAAATTCAAGGAAAAGAAAGGGAATACCTCGTAGGGCTCCTTTCTTCTAA 672 0.4241 MAIANKSTLTMECMEVPPWLEHLLSTTFFSLCEVHTNAPRNERKMYCLDCSDQSSCIHCITSSHKGHRVIQIRRSSYQDVVRVAEIQKAVDITGVQTYVINSARIIFLNTRTPTNSQQNPKSSGKVSVKNHYKCVACTRNLVDHCHFCSLECKMEWTKKIECESSATEGMPRRLLSQEEEEEVHQRILGGLYGRRPSPSTESPPKASSNSRKRKGIPRRAPFF* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1550 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 14 222 - -
Dod10g1550 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 14 222 - -
Dod10g1550 223 SUPERFAMILY B-box zinc-binding domain 30 74 - -
Dod10g1550 223 MobiDBLite consensus disorder prediction 189 223 - -
Dod10g1550 223 Pfam PLATZ transcription factor 73 154 IPR006734 -
Dod10g1550 223 Gene3D Classic Zinc Finger 27 92 - -
Dod10g1550 223 CDD Bbox2 31 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1550 Dod-Chr10 36242969 36244526 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dod10g1550 PLATZ 1.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1550 - - aip:107610412 230.335