Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1537 ATGGCGGAGGACCGCAATGAGGGGAGCCAGTACAGTTCGGAGGACGAAGGCACCGAGGATTACAGAAGAGGAGGGTACCATGCGGTTCGGATTGGGGATTCTTTCAGGAATGGGTGCTATGTTGTTCAGAGCAAGCTCGGTTGGGGCCATTTTTCCACCGTTTGGCTCGCTTGGGACACTCTCAAATCGCAATATGTTGCCCTAAAGATTCAAAAGAGTGCTCAGCACTACTCTGAAGCAGCAATGGATGAAATAAAGATTCTCAAACAAATTGCGGATGGGGACCCACATGACAAGAAATGTGTCGTAAAGCTTCTGGATCACTTTAAGCATTCAGGGCCTAATGGCCAGCATGTGTGTATGGTTTTTGAATTCCTTGGCGACAATCTTCTCACCCTCATCAAGTATAGTGATTATCGTGGGGTTCCCCTTCCCATGGTTAAGGAAATTTGTTTCCACATTTTGGTGGGTTTGGATTACTTGCATCGCGAGCTTTCTGTAATACACACTGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCACCAATAGATCCATCTAAAGATCCTAGAAAATCAGGTGTTCCACTTGTTGTTCCAAATACCAATGACAAGACTGTGTCCAAAAATGGGACCACCAAAGATGATAAAAATTTGAATGGAGATCTGACCAAGAACCAGAAAAAGAAAATGCGGAAGAAGGCTAAAAAGGCAGCCCAAGCCTGTACCGGGAAGGAAATTCCTGATGAAGCGGAGGAGGATGCTAACGTACATGAGCAAGATGAATGTAGTAAAGATGTGAAGCCAAGTGTAGAGTCTGTTGCAGGTAAACATAATAGTCCTGTGAGCAAAGATGAATCTACAAATACCTCTGAAACTAAGGATGGTCCACAAGGAAGTAATGGTCATGGCAGAGGTAGCCGTCCTGAGAGAAAGAAGTTACTTGCAGCTGTTGATCTTAACTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAGACAAGGCAATACAGGTGTCCTGAGGTTATTCTTGGATCTAAATACTCAACTCCAGCAGATCTGTGGTCTTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGACAGGGACGAGGATCATCTGGCCTTGATGATGGAGCTTCTTGGAATGATGCCTCGCAAGATTGCATTAGGTGGTCGCTATTCCCGGGAATTCTTCAATAGATATGGTGATTTGAGGCACATCCGTCAGTTGCGTTTCTGGCCACTTAACAAGGTGCTGATGGAGAAGTATGATTTCAGTGAGCAAGATGCAAGTGACATGGCTGATTTCCTTATCCCATTACTTGATTTTGTCCCTGATAAGAGGCCAACAGCTGCTCAGTGCCTTAGTCATCCATGGATCAGTGCAGGTCCCCGGACTCCTGAACCTTCGATGTCTACTCTGCAACCTGATGCTAGAGATGGAGACACGGCTGAAAAGATGGAGGGAAAGGCTGAGCTGGAAGCTGTGGAAGTTGGTATTGGGAATATAGATCTCGATAGAACTCCGGAGCCACTTGAAGAGTTCCAACCTATACTCTCACCAACATAG 1632 0.4504 MAEDRNEGSQYSSEDEGTEDYRRGGYHAVRIGDSFRNGCYVVQSKLGWGHFSTVWLAWDTLKSQYVALKIQKSAQHYSEAAMDEIKILKQIADGDPHDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSPIDPSKDPRKSGVPLVVPNTNDKTVSKNGTTKDDKNLNGDLTKNQKKKMRKKAKKAAQACTGKEIPDEAEEDANVHEQDECSKDVKPSVESVAGKHNSPVSKDESTNTSETKDGPQGSNGHGRGSRPERKKLLAAVDLNCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSREFFNRYGDLRHIRQLRFWPLNKVLMEKYDFSEQDASDMADFLIPLLDFVPDKRPTAAQCLSHPWISAGPRTPEPSMSTLQPDARDGDTAEKMEGKAELEAVEVGIGNIDLDRTPEPLEEFQPILSPT* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1537 543 CDD STKc_SRPK 29 481 - -
Dod10g1537 543 SMART serkin_6 40 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1537 543 MobiDBLite consensus disorder prediction 208 225 - -
Dod10g1537 543 Gene3D Transferase(Phosphotransferase) domain 1 123 482 - -
Dod10g1537 543 MobiDBLite consensus disorder prediction 480 508 - -
Dod10g1537 543 MobiDBLite consensus disorder prediction 182 308 - -
Dod10g1537 543 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Dod10g1537 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Dod10g1537 543 PANTHER SERINE KINASE-LIKE PROTEIN 8 538 - -
Dod10g1537 543 MobiDBLite consensus disorder prediction 245 271 - -
Dod10g1537 543 MobiDBLite consensus disorder prediction 1 20 - -
Dod10g1537 543 ProSiteProfiles Protein kinase domain profile. 40 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1537 543 MobiDBLite consensus disorder prediction 275 299 - -
Dod10g1537 543 MobiDBLite consensus disorder prediction 523 543 - -
Dod10g1537 543 SUPERFAMILY Protein kinase-like (PK-like) 36 496 IPR011009 -
Dod10g1537 543 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Dod10g1537 543 Pfam Protein kinase domain 40 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1537 543 Pfam Protein kinase domain 318 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1537 543 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1537 Dod-Chr10 36080117 36084704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1537 1 527 EF-hand Containing Proteins AT5G22840 66.294 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Dod10g1537 Pkinase 2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1537 K08832 - gmx:100809984 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1537 10 36080117 36084704 Dod10g1537 10 36080117 36084704 ECH