Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1517 ATGAGATTGGAGAAATGCTGGTTTTGTTCTTCAACCGTTTACCCTGGACATGGAATCCAGTTTGTTCGTAACGATGCCAAGATTTTCCGGTTCTGTAGATCTAAATGCCATAAGAACTTTAAAATGAAGAGGAACCCACGTAAAGTGAAATGGACCAAGGCATACCGGCGAGTCCATGGAAAGGATATGACACAGGATTCAACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCTGAGAGATATGACAGGAATCTTGCGGAGAATGTCCTCAAGGCCATTCCTAAGATTGACAAGATCAGAGTCAGCAGGGAGGAGAGACACCATAAGAACAGGATGAAAGGCAAAAAGGAGAAGCTTATCAAGGAGGCGGCGAAGGAGTTGGAGCAGGGCATCAGTTTGGTCAAAGCTCCTTCTGTGCTTCAACAGGATCCATCTCTCACTTTACCAAAGATCAAAGTCAGTGTTTCCCAACAGCAATCACAGGAGAATCAACCCATGGAAGAGTGA 507 0.4497 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNRMKGKKEKLIKEAAKELEQGISLVKAPSVLQQDPSLTLPKIKVSVSQQQSQENQPMEE* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1517 168 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Dod10g1517 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Dod10g1517 168 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Dod10g1517 168 PANTHER 60S RIBOSOMAL PROTEIN L24 1 168 IPR000988 -
Dod10g1517 168 SMART 4TRASH 6 44 IPR011017 -
Dod10g1517 168 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Dod10g1517 168 PANTHER BNAA04G10330D PROTEIN 1 168 - -
Dod10g1517 168 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Dod10g1517 168 Coils Coil 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1517 Dod-Chr10 35813748 35815310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1517 1 168 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 67.857 6.60e-83 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1517 K02896 - gmx:100306000 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1517 10 35813748 35815310 Dod10g1517 10 35813748 35815310 ECH