Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1515 ATGAACTTTGAGATTGAATCCCAATTGCCATTCCCTTCTTCTTCCTCAACTAATTATATTTCCCCTTCTACATGCCACCTCTCACCATCACCAAACACACAACCTGACCCTAATCCATCAGAATCGTTACATGCACAATTCATTGCACCCCACAAAAGAAAAGGAGGAAGGAAGAAGTTTCAGGAGACTCGGCACCCAATCTACAGGGGTGTGCGGCACAGAAAGGGGAAATGGGTTTGTGAAGTAAGGGAACCAAAGAAGCCAACGAGGATATGGCTAGGGACATACCCTACACCAGAGATGGCTGCCAGGGCACATGATGTGGGTACACTAGCCATTAGGGGCACCTCAGCAGTGCTAAACTTTCCAAATTCAGCCTCATATCTTCCAAATATAAATTCTTCTTCACCTAAGGATATAAGAGCAGCTGCAAAACAAGCTGCTGAGGCTTTCAGACCAAACAGCTGTTCCTCCAAGTTCGCCACTGGGAGAACAAGGTGTAAAAATAAGAAAGTAACAAAGGTTCCTTTGAATGATGCTAACAAGATTCAGGAAATTGTGTTGGACTCTTCTTTGTTGAGCATGAACAATACAAATGGTGATGTTAGCAATAGCGGGGGAGAGAAAAACAACGATTCAGATCCGTGTGCGGCAGCAACAATGTTCTTGGATGAGGAGGCATTGTTTAATATGCCCGGTCTCTTGGATGGAATAATGGCAGAGGGTTTGTGTCTTGTCCCGCTGTCTTCTATGCAAAGCTCTAATTATTCGGACTGGGAATGGGATGATGTTGCTGCTTGTAACACGGACTTCAATTTATGGACGGATTAA 831 0.444 MNFEIESQLPFPSSSSTNYISPSTCHLSPSPNTQPDPNPSESLHAQFIAPHKRKGGRKKFQETRHPIYRGVRHRKGKWVCEVREPKKPTRIWLGTYPTPEMAARAHDVGTLAIRGTSAVLNFPNSASYLPNINSSSPKDIRAAAKQAAEAFRPNSCSSKFATGRTRCKNKKVTKVPLNDANKIQEIVLDSSLLSMNNTNGDVSNSGGEKNNDSDPCAAATMFLDEEALFNMPGLLDGIMAEGLCLVPLSSMQSSNYSDWEWDDVAACNTDFNLWTD* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1515 276 Pfam AP2 domain 66 108 IPR001471 GO:0003700|GO:0006355
Dod10g1515 276 SMART rav1_2 67 129 IPR001471 GO:0003700|GO:0006355
Dod10g1515 276 MobiDBLite consensus disorder prediction 1 41 - -
Dod10g1515 276 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 1 275 - -
Dod10g1515 276 CDD AP2 66 125 IPR001471 GO:0003700|GO:0006355
Dod10g1515 276 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 275 IPR045277 GO:0003700
Dod10g1515 276 Gene3D AP2/ERF domain 67 124 IPR036955 GO:0003700|GO:0006355
Dod10g1515 276 MobiDBLite consensus disorder prediction 1 43 - -
Dod10g1515 276 ProSiteProfiles AP2/ERF domain profile. 67 123 IPR001471 GO:0003700|GO:0006355
Dod10g1515 276 SUPERFAMILY DNA-binding domain 67 125 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1515 Dod-Chr10 35794873 35796074 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1515 52 275 AP2-EREBP Transcription Factor Family AT4G25470 41.778 6.97e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod10g1515 AP2 2.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1515 - - var:108332912 270.396