Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1507 ATGGACCCATCCCCATCACCATCTCCATGGCTTGACGACCTCGCCGACGACCTCAACTCCATAAGCTTCGCCTCCACCGCCACCACCGGCGACATCAACCGCAGCACCAGCTTCAGCTCCGAGACCACCACCCTCACCGCCGCCTCCACCTCCGCCCCTACAAAACCCCACGCGCCCTCCTCCGACCCCCGCTGGTCCGCCATCCACCTGATCCGATCCGATTCCCCCTCCCGCCGCATCCTCCCCTCCGACCTCCTCTTCTACCGCCGCCTCGGCTCCGGCGACATCAGCTCCGTCTACCTCGCCGAGCTCAAGCCCTCCCCATCCTCCTCCTCCTCTTCCTCCGTGGTTTTCGCCGCGAAGGTGATGGACAAGAAGGAGTTAGCCAGCAGGAGCAAGGAAGGGAGGGCGAGGACAGAGAGGGAAATTCTTGAATTGTTGGACCATCCCTTTCTGCCCACTCTCTACGCCACCATCGATGCCCCCAAATGGCTCTGCCTCCTCACCGAGTTCTGCCCCGGCGGTGACCTCCACGTCCTCCGCCAGCGCCAGCCTAACAAACGCTTCTCCGAACCCGCCGTCAGGTTCTACGCATCAGAGGTGTTGGTGGCACTTGAATACCTTCACATGCTTGGGATAGTGTACCGTGATCTCAAGCCCGAGAACGTGTTAGTTCGATCGGACGGTCACATCATGCTCACTGACTTTGACCTCTCGTTAAAATGTGATGAATCCAGTACACCAATGGCTCAGATCATCTCTGATCATAACTCTGCTCACGTAGCCCCCAAAAGGGATCCCAACATTGAACCCTCTCAATTCACCTCGTCCTCGTGCATACTACCCAACTGTATAGTCCCCGCGGTGTCATGTTTCCACCCAAAACGCAAGCGGAAGAAGAAGCAAAGCCACCGCAGTGGGCCTGAGTTTGTGGCCGAGCCCATCGATGTCCGGTCCATGTCATTCGTGGGGACCCACGAGTACTTGGCCCCGGAGATCGTGTCTGGTGAGGGCCATGGTAGTGCCGTGGATTGGTGGACCTTAGGGATATTTATATTTGAATTGTTTTATGGTGTGACACCCTTTAGGGGCATGGACAATGAGCTAACGTTAGCAAACATTGTGGCTCGAGCCCTTGAGTTCCCAAAGGAACCCACCGTGCCAGCCACGGCAAAGGACCTTATCTCACAGCTATTGGTTAAGGACCCCGCAAGGAGGCTGGGGTCAATAATGGGGGCTTCCGCTATCAAGCACCACCCATTTTTCCAAGGTGTGAATTGGGCACTGCTAAGGTGTACAACTCCACCCTTTGTGCCCCCACCTTATTCTAAAGAAGCTGTATCTGATGAAAGTTGTCCTGAGACTCCCATTGATTATTATTGA 1383 0.5611 MDPSPSPSPWLDDLADDLNSISFASTATTGDINRSTSFSSETTTLTAASTSAPTKPHAPSSDPRWSAIHLIRSDSPSRRILPSDLLFYRRLGSGDISSVYLAELKPSPSSSSSSSVVFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYATIDAPKWLCLLTEFCPGGDLHVLRQRQPNKRFSEPAVRFYASEVLVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDESSTPMAQIISDHNSAHVAPKRDPNIEPSQFTSSSCILPNCIVPAVSCFHPKRKRKKKQSHRSGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGMDNELTLANIVARALEFPKEPTVPATAKDLISQLLVKDPARRLGSIMGASAIKHHPFFQGVNWALLRCTTPPFVPPPYSKEAVSDESCPETPIDYY* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1507 460 SMART serkin_6 85 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1507 460 ProSiteProfiles Protein kinase domain profile. 85 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1507 460 PANTHER OS11G0150700 PROTEIN 8 460 - -
Dod10g1507 460 MobiDBLite consensus disorder prediction 30 57 - -
Dod10g1507 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Dod10g1507 460 SUPERFAMILY Protein kinase-like (PK-like) 61 448 IPR011009 -
Dod10g1507 460 Gene3D Transferase(Phosphotransferase) domain 1 318 440 - -
Dod10g1507 460 CDD STKc_phototropin_like 89 441 - -
Dod10g1507 460 Gene3D Phosphorylase Kinase; domain 1 87 175 - -
Dod10g1507 460 PANTHER FLIPPASE KINASE 1-RELATED 8 460 - -
Dod10g1507 460 Gene3D Transferase(Phosphotransferase) domain 1 176 247 - -
Dod10g1507 460 Pfam Protein kinase domain 319 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1507 460 Pfam Protein kinase domain 89 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1507 460 MobiDBLite consensus disorder prediction 30 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1507 Dod-Chr10 35660106 35664921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1507 9 460 AGC Kinase Gene Family AT3G44610 68.627 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod10g1507 Pkinase 4.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1507 K08286 - gmx:100792738 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1507 10 35660106 35664921 Dod10g1507 10 35660106 35664921 ECH