Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1505 ATGAAGGTGATTGCTGCGTATTTGCTGGCCGTTTTGGGAGGCAACACTTCCCCTTCTGCTGATGATCTCAAGAACATCCTTTCCTCAGTTGGAGTTGAGGCTGAGGATGAGAAGATTGAGTTGCTCTTGACTGAAGTGAAGGGCAAGGATATCACTGAGCTAATTGCTAGTGGAAGAGAGAAGCTGGCTTCAGTGCCTTGTGGTGGTGGCGCAGTTGCTGTTGCTGCTGCACCTGCAGGAGGGGCTCCAGCTGGTGGTGCTGCACCCGCCGCTGAAGCAAAGGAAGAAAAGAAGGTGGAAGAGAAGGAGGAGTCAGATGATGATATGGGTTTCAGCTTATTCGACTAA 348 0.5086 MKVIAAYLLAVLGGNTSPSADDLKNILSSVGVEAEDEKIELLLTEVKGKDITELIASGREKLASVPCGGGAVAVAAAPAGGAPAGGAAPAAEAKEEKKVEEKEESDDDMGFSLFD* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1505 115 MobiDBLite consensus disorder prediction 91 105 - -
Dod10g1505 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Dod10g1505 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 115 - -
Dod10g1505 115 Gene3D - 1 59 IPR038716 -
Dod10g1505 115 Pfam 60s Acidic ribosomal protein 17 114 - -
Dod10g1505 115 MobiDBLite consensus disorder prediction 80 115 - -
Dod10g1505 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Dod10g1505 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1505 Dod-Chr10 35649225 35650835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1505 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 67.826 1.53e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1505 K02943 - ming:122089001 141.354