Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1485 ATGGCGAGCCACGGAATAGGAAGACTTGGTTTGTCTGAGGCAGGACCTTCGAGTCACCACCACCATGTCCCTTATGGAGTTTTACAAGGGATTAATACTCCTACATCAAGCTTAATCAATCAAGGATCTGCTTTTAATTTTGGAGAGCTTGAAGAGGTGATTGTTCTGCAAGGAGTTAAGAGTAGAAATGATGAAGGGAAAGCACCTTTATTTACAGCCAAACCTGCAGCTACACTAGAAATGTTCCCTTCATGGCCAATGAGATTCCAGCAAACACCAAGAGGAGGTTCATCAGGAGGGGAAAGCACTGATTCAGCTCTTTCAACCAAAACGGAGCCACCCTTTGAAGCAGAATCTCCCATGAGTGGCAAAAAAGCAGCATCTTCATCAGATCATCATCATCATGCTTTTGATCAGCAGAGAATACAGCAACTTCAACATGACATGATGGCTAGTAGTGATCATGCCTCAAGAACAGGCAAATCACCCCAAGAAAAGAGGAAGGGAGCTGGTTCTACATCTGATAAACAACTTGATGCAAAGACACTGAGACGTTTAGCTCAAAACAGAGAGGCTGCAAAGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAGCTAGAGTCAAGTAGATTAAAGCTTACCCAGCTCGAACAAGACCTTCAAAGGGCTCGCTCTCAGGGAGTATTCGTGGATTGTGGTGGTGTTGGGGGCAATCTAAGTCCGGGAGCTGCGATGTTTGACATGGAATATGCAAGGTGGTTGGAAGAAGACCAGCGTCTGATGGGGGAGCTTAGGAACGGGTTGCAAGCACCATTATCAGACGGTGAAATGAGAGTGATCGTGGATGGATACCTGTCCCATTATGATGACCTCTTCAGGCTCAAAGGAGTGGCAGCAAAATCAGATGTGTTCCACCTCATCAATGGCTTGTGGACTTCCCAAGCTGAACGCTGCTTCCTCTGGATTGGTGGTTTTAGGTCCTCCGAGCTCATCATGATGTTGATACAACAGTTGGAGCCACTGGCGGAGCAGCAGATAATGGGGATGTATGGGCTGCGGCATTCCACACATCAAGCTGAGGATGCACTCTCTCAAGGCCTTGACCAGCTTCAGCAGTCTCTGGTCGACACCATTGCCGGAGGCCCCATCGTTGACGGTGTGCAACAGATGGTTGTCGCTATGGGCAAGCTTGCTAATCTTGAAGGATTTATTCGCCAGGCTGATAATTTGAGACAGCAAACTCTTCATCAATTATGTCGATTACTAACAGTTCGTCAAGCAGCAAGGTGTTTTCTTGTGATTGGGGAGTACTATGGCCGCCTTCGTGCCCTTAGTTCTCTTTGGGCATCAAGACCACGACAGACTTTGATCAACGATGAAAACTCATGCCAAACAACCACGGACTTGCAAATGGTCCAACCTGCTCAGAATCATCATTTCCCCAGTTTCTGA 1455 0.4715 MASHGIGRLGLSEAGPSSHHHHVPYGVLQGINTPTSSLINQGSAFNFGELEEVIVLQGVKSRNDEGKAPLFTAKPAATLEMFPSWPMRFQQTPRGGSSGGESTDSALSTKTEPPFEAESPMSGKKAASSSDHHHHAFDQQRIQQLQHDMMASSDHASRTGKSPQEKRKGAGSTSDKQLDAKTLRRLAQNREAAKKSRLRKKAYVQQLESSRLKLTQLEQDLQRARSQGVFVDCGGVGGNLSPGAAMFDMEYARWLEEDQRLMGELRNGLQAPLSDGEMRVIVDGYLSHYDDLFRLKGVAAKSDVFHLINGLWTSQAERCFLWIGGFRSSELIMMLIQQLEPLAEQQIMGMYGLRHSTHQAEDALSQGLDQLQQSLVDTIAGGPIVDGVQQMVVAMGKLANLEGFIRQADNLRQQTLHQLCRLLTVRQAARCFLVIGEYYGRLRALSSLWASRPRQTLINDENSCQTTTDLQMVQPAQNHHFPSF* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1485 484 MobiDBLite consensus disorder prediction 90 112 - -
Dod10g1485 484 Pfam Seed dormancy control 262 335 IPR025422 GO:0006351|GO:0043565
Dod10g1485 484 SMART brlzneu 177 253 IPR004827 GO:0003700|GO:0006355
Dod10g1485 484 MobiDBLite consensus disorder prediction 159 182 - -
Dod10g1485 484 PANTHER TRANSCRIPTION FACTOR TGA9 67 461 - -
Dod10g1485 484 SUPERFAMILY Leucine zipper domain 181 224 IPR046347 GO:0003700|GO:0006355
Dod10g1485 484 MobiDBLite consensus disorder prediction 87 182 - -
Dod10g1485 484 Gene3D - 180 228 - -
Dod10g1485 484 MobiDBLite consensus disorder prediction 127 141 - -
Dod10g1485 484 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 179 223 IPR004827 GO:0003700|GO:0006355
Dod10g1485 484 MobiDBLite consensus disorder prediction 142 158 - -
Dod10g1485 484 Pfam bZIP transcription factor 180 222 IPR004827 GO:0003700|GO:0006355
Dod10g1485 484 MobiDBLite consensus disorder prediction 1 21 - -
Dod10g1485 484 CDD bZIP_HBP1b-like 181 231 - -
Dod10g1485 484 ProSiteProfiles DOG1 domain profile. 244 452 IPR025422 GO:0006351|GO:0043565
Dod10g1485 484 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 184 199 IPR004827 GO:0003700|GO:0006355
Dod10g1485 484 PANTHER TRANSCRIPTION FACTOR TGA9 67 461 - -
Dod10g1485 484 Coils Coil 200 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1485 Dod-Chr10 35216551 35223861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1485 129 484 bZIP Transcription Factor Family AT1G08320 66.393 1.12e-172 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod10g1485 DOG1 8.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1485 K14431 - gmx:100775461 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1485 10 35216551 35223861 Dod10g1485 10 35216551 35223861 ECH
Dod10g1485 10 35216551 35223861 Dod03g2371 03 54673674 54683065 PCT