Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1469 ATGGAGGATCGCCCAACTGGTTTTCGCTTCTACCCAACAGAAGAAGAACTAGTTGCATTCTACCTACACAACCAGCTACAAGGGCAACGAAATGACATACACAGAGTTATCCCAGTCATCCACATCAATGGCATAGAGCCTTGGAGCCTTCCAATGTTGCTGGTTTGCATGCAGCACTTGCGGGGGAGCTGTGTAGGGGAGAGACGGGGCAATGGTTTTTTCTTTGTGCTAATGCAAGAGAGGGAAGCCAGAGGAGGCAAACCGAACAGAACAACTGCTTCTGGCTATTGGAAGGCCACGGGCTCCCCTGGGTCATTGGTGTCAAGAAAACCATGGTGTTTTACAAAGGCAAAGCTCCTGCTGGAAGGAAAACTGAATGGAAGACGCACGAGTACCGAGCCATTGAAGTCTCTAACCCCTAACCAATCTACCACACCCACTCCTAAGGTAAGGAGCGAATTCAGCTTGTGTCGTGTTTATGTCACATTGGGAAGCTTTCGAGCATTTGAACGAGGACCACCAAGACTGCTGGGGTTTGGGCTTGCTGGTGAAAGAGGTGATGGTTCAATGGTATTGGCCAATGGGTCAAGTTCGTGTGAAACTTCCCACTCGGGTGGGGGAGGAGACCTAAGCGGTGCTGGTCCCCTAGAAACTGGAGGGTCAAGTATCGGTGGTCCCAATTGGAATGCAAGCTGTAATGGTGTTGATGAACCTATGTGGGAATGGGAACAACTCAGTCGGCTCTAA 747 0.502 MEDRPTGFRFYPTEEELVAFYLHNQLQGQRNDIHRVIPVIHINGIEPWSLPMLLVCMQHLRGSCVGERRGNGFFFVLMQEREARGGKPNRTTASGYWKATGSPGSLVSRKPWCFTKAKLLLEGKLNGRRTSTEPLKSLTPNQSTTPTPKVRSEFSLCRVYVTLGSFRAFERGPPRLLGFGLAGERGDGSMVLANGSSSCETSHSGGGGDLSGAGPLETGGSSIGGPNWNASCNGVDEPMWEWEQLSRL* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1469 248 Gene3D NAC domain 13 163 IPR036093 GO:0003677|GO:0006355
Dod10g1469 248 Pfam No apical meristem (NAM) protein 5 108 IPR003441 GO:0003677|GO:0006355
Dod10g1469 248 MobiDBLite consensus disorder prediction 130 149 - -
Dod10g1469 248 ProSiteProfiles NAC domain profile. 4 162 IPR003441 GO:0003677|GO:0006355
Dod10g1469 248 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 246 - -
Dod10g1469 248 SUPERFAMILY NAC domain 4 128 IPR036093 GO:0003677|GO:0006355
Dod10g1469 248 MobiDBLite consensus disorder prediction 192 230 - -
Dod10g1469 248 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1469 Dod-Chr10 35076962 35079545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1469 1 246 NAC Transcription Factor Family AT5G22380 44.186 3.20e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod10g1469 NAM 2.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1469 - - gmx:100784960 213.772