Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1468 ATGGAGAATATGCCCCCACCCGGTTTTCGCTTCTACCCAACAGAAGAAGAGCTTGTTGGCTTCTACTTACACAACCAGCTAGAAGGGCAAAGAAATGACATCAGCAGGGTTATTCCAGTCATTGACATCAATGGCATAGAGCCTTGGAACCTTCCATCACTTGCAGGGGAGCTGTGTCGTGGGGAGACTGAGCAGTGGTTTTTCTTTGCGCCAAGGCAGGAGAGGGAAGCCAGAGGGGGCAGAATAAACAGAACCACTGCTTCTGGGTATTGGAAGGCCACAGGCTCCCCAGGGTACGTGTACTCTTCCGATAACAAGGTCATTGGAGTCAAGAAAACCATGGTCTTTTACAAAGGCAGAGCTCCTTCTGGAAGGAAAACCAAATGGAAGTTGCATGAATACCGAGCCATTGATCAAGTGTCTAACCATTCCCCCACAGCCATTCCAAAGTTGAGGCACGAATTCAGCTTATGTCGTGTTTATGTGATATCGGGAAGCTTTCGAGCTTTTGATCGACGGCCACCTGAGGTGCCAAGAGTAGTGGGGTTGAGAGAAGGTGAAGGTTCTTCAAGTGGTCAGCAGCAGCAGGAAGGGGGAGCAGCAAGGGTGGCCAATGAATCAAGCTCGTATGAAACTTCCTCAGGTGGAAGAGGAGGAGGAGGAGGAGACCAAAGTGGTGCTGGAGGATCAAGTGCTGGTGGTGGTGGTACCAATTGGAATGCGAGTGGTAGTGGTGGAGTGGATGAAGAAGAACCTCTATGGGAATGGGAACAGTTCAATTGGCTCTAA 789 0.5006 MENMPPPGFRFYPTEEELVGFYLHNQLEGQRNDISRVIPVIDINGIEPWNLPSLAGELCRGETEQWFFFAPRQEREARGGRINRTTASGYWKATGSPGYVYSSDNKVIGVKKTMVFYKGRAPSGRKTKWKLHEYRAIDQVSNHSPTAIPKLRHEFSLCRVYVISGSFRAFDRRPPEVPRVVGLREGEGSSSGQQQQEGGAARVANESSSYETSSGGRGGGGGDQSGAGGSSAGGGGTNWNASGSGGVDEEEPLWEWEQFNWL* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1468 262 ProSiteProfiles NAC domain profile. 5 163 IPR003441 GO:0003677|GO:0006355
Dod10g1468 262 MobiDBLite consensus disorder prediction 187 219 - -
Dod10g1468 262 MobiDBLite consensus disorder prediction 230 244 - -
Dod10g1468 262 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Dod10g1468 262 Gene3D NAC domain 14 166 IPR036093 GO:0003677|GO:0006355
Dod10g1468 262 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 261 - -
Dod10g1468 262 MobiDBLite consensus disorder prediction 182 262 - -
Dod10g1468 262 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
Dod10g1468 262 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1468 Dod-Chr10 35022058 35023763 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1468 8 261 NAC Transcription Factor Family AT5G22380 54.118 8.59e-88 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod10g1468 NAM 2.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1468 - - gmx:100780264 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1468 10 35022058 35023763 Dod10g1468 10 35022058 35023763 ECH
Dod10g1468 10 35022058 35023763 Dod03g2344 03 54305501 54308352 PCT