Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1454 ATGATGGAAGGGGTTTCAAAGGAAGCACAGATGTCTATTGCTGCTTCTTCAATGTTTCCTGGGTTTAGGTTCTGTCCCACTGACGAGGAGTTGATCTCTTATTACCTCAGGAAGAAGCTTGAAGGCCATGAAGAGAGCGTTCAAGTCATTGCCGAGGTTGACCTTTGCAAATCTGAGCCTTGGGATTTGCCAGCCAAATCATTCATTGAGTCAGACAACGAGTGGTTCTTCTTCTCTCCCCGTGGACGAAAGTATCCAAACGGTTCACAAAGTAAAAGAGCAACTGAAAGTGGCTACTGGAAGGCCACTGGAAAAGAGCGCAATGTTAAGTCAGGTCCTAATGTTATAGGTACAAAGCGGACTTTGGTATTCCACTTAGGGCGTGCACCTAAAGGGGAGAGGACTGAATGGATTATGCATGAGTACTGCATCAATGACAAATCTCAGGATTCTTTGGTGGTTTGTCGCCTCAAGAAGAACATAGACTTCCGTGTGAATGATAATTCAAATAGAGCTTCTTCAAGTCAAATGAACCAAGTAAATTCACATGAAAGTGATTGTGGTATCTCAGAAGGTGTTTTTGATCAAATGAGAGTGTGTCAGCAAGATAAAGAGGTTGGATGTAGCTCCAAGCGTAGCAGTAGCGGTTATAGTTCCCCTTCAGCTGAACAAATTGATTCTGTGACTGAATACAGTCAGAGACCAGCTCCTGAAGCCACTTTGACAGAGTCTTCTGGTCACCAAAAGGCCGATGAAGAGGATTGTTTTGCAGAGATACTCAAGGACGATATCATCAAATTAGACGAATCATCACTCTCAGAAGAGGGTCACACAACACCACCACAGGATCGTGAGCAGATGCAGCATCCTTGCCAAGGGACAGCACAAAGGAGAATAAGATTAAGGGTTAGGAACTCAAGGCCTCCTCCTGCAGGAGGAGTTCGTTTCCCAAGCTCAAAGCAATCATCAAAGAATACCTCATTCTTTGCTAGAATGAACAACCGTTCGGTGGTATTTGCTTTCTTGGTTTTCACTTTGGCAGCTATATTTTTGCTCCTTATTGGGTGGTCTCAAACTAGTCAAACATTTTGGGGAGTTCTTGGGGGTTAA 1110 0.4405 MMEGVSKEAQMSIAASSMFPGFRFCPTDEELISYYLRKKLEGHEESVQVIAEVDLCKSEPWDLPAKSFIESDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERNVKSGPNVIGTKRTLVFHLGRAPKGERTEWIMHEYCINDKSQDSLVVCRLKKNIDFRVNDNSNRASSSQMNQVNSHESDCGISEGVFDQMRVCQQDKEVGCSSKRSSSGYSSPSAEQIDSVTEYSQRPAPEATLTESSGHQKADEEDCFAEILKDDIIKLDESSLSEEGHTTPPQDREQMQHPCQGTAQRRIRLRVRNSRPPPAGGVRFPSSKQSSKNTSFFARMNNRSVVFAFLVFTLAAIFLLLIGWSQTSQTFWGVLGG* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1454 369 SUPERFAMILY NAC domain 9 159 IPR036093 GO:0003677|GO:0006355
Dod10g1454 369 MobiDBLite consensus disorder prediction 270 290 - -
Dod10g1454 369 MobiDBLite consensus disorder prediction 208 244 - -
Dod10g1454 369 Gene3D NAC domain 27 164 IPR036093 GO:0003677|GO:0006355
Dod10g1454 369 MobiDBLite consensus disorder prediction 208 250 - -
Dod10g1454 369 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Dod10g1454 369 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Dod10g1454 369 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 354 - -
Dod10g1454 369 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 12 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1454 Dod-Chr10 34872209 34876728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1454 5 287 NAC Transcription Factor Family AT2G27300 53.472 2.31e-94 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod10g1454 NAM 2.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1454 - - gsj:114373381 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1454 10 34872209 34876728 Dod10g1454 10 34872209 34876728 ECH