Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1429 ATGGCAACGTACTTTCATGGAATCCAATCTTCTTCTTCTTCTCCTGCGGATGGGTTGCAGACACTTTACCTTATGAACCCAAACTACCACGCGCCTTACTCCGACGCCCCGCACCACCCAACAACTACGCCCAACATGCTCCTCCTCAATCCCAACGCCGCCGCCGCCACCACCACTCACCACGCTCACGCGCTCAACTTTTCTAACCTCTCCCACGCGCCACCACTACCATCCCCCAACCAACAACAACAGCAACACCTCGTAAACATCCCCGGATCTGCCAACTCCGACGACAACTCCCGGCCGTCACTTTTCGGATCACACGAGATCACCACCGCCTTCCACGGCTTCTCGGGCTGCTCCGCCTCCGCTGTCGCACCGCGCGTGCACTATAACCTGTGGGGGTCTGTAGTCGACCAGACTCAACCGTCGTCCTCGGCGGCGACGCCGTCTAGCAGCTCCGCTGGCGGCGGCGATATGTCACCGCAAATGGGTTTCCGGCGGCCTAGTCAGCAAGGCTTGTCGCTGAGCCTCTCCTCACAGCAGCAGCAGCAACAGCAACAACAACAAACAGTTAATTATAGGTCTCTCTCCGGCGAAGTTGCCGGCGGCGGCGGTGTCGGTAACTCACCGTCGTCGGTGTCAAATGGGATCTCGAGCGTGCAGAGTGTTATCTTGGGGTCCAAGTATTTGAAAGCCGCGCAGGAGCTTCTGGATGAGGTTGTGAACGTGGGTAATAAGGGAATTTACAAGGAGGAGTTGGGAGAGAAGGTGAAAGGGAATAGGGATTCCACTTCTGGGGTTGGCGAGGGTTCCAGTGGTGGCGGTGGAGGAGAGAACAGTGATGCAGGGAAGCATGTTGCTGAACCCACAACTGCACAGAGACAAGAGCTTCAGATGAAGAAGTCCAAGCTTGTCAGCATGCTTGATGAGGTTGAGCAAAGGTACAGGCAATATCACCACCAAATGCAAATTGTGATATCATCATTTGAGCAGGCAGCGGGTTTTGGGGCAGCAAAATCTTACACAGCTCTTGCCCTAAAGACAATCTCAAAGCAATTTCGGTGCCTCAAAGATGCAATCTCTTCACAAATCAGAGCAACGAGCAAGACATTGGGTGAGGAAGATTGCTTAGGAGTTAAAGTGGAAGGTTCGAGGCTTAGGTATGTTGACCACCATCTTCGGCAACAAAGGGCACTGCAGCAGCTGGGAATGATCCAGCCCAATGCTTGGAGGCCCCAGAGAGGCTTGCCTGAGAGAGCTGTTTCCATTCTTCGTGCTTGGCTTTTTGAACATTTCCTTCACCCATATCCTAAGGACTCCGATAAAGTTATGCTAGCAAAGCAAACTGGACTTACTAGGAGCCAGGTGTCAAACTGGTTTATCAATGCCCGAGTTCGGCTGTGGAAACCAATGGTGGAAGAAATGTACATGGAAGAAATCAAGGAGCAAGAACACAACAATAATGGCTCAGATGATAACACCATCAGATCAAAGGAATCGAGCAAGGAGGTGGGATCAACATCAAATGCTGCACCGGAATCAGGTGCCATTAAGCTTGATCAGATTAAAATTCTGCAAACAAAACAAGAATGCTTCAACAACCATAACACTTCTCCAACTGAGATCTCAGCAAATTCTTCAATGTCCACTTCTCCCATGGGAGGATCCCTTCAATCCCACACCGGTTTCCATCTTGCAGGATCATCTGGCATGCAAAGGATTCCAAACAAGCCAAGAAGTTCAGAGATGCTGAACTCTTCAAGTAGTATCCTTTCAGTGGACATGGAAATGAAGCATGGTGATCACAATAATAGAGAAGCCAACACAAAGTTTATTGGCATCGAAAGTCACCCCAAAGATGGATACCCTTTAATGACGGGAAACACAAACCATAATGGGGGATATGGTGCTTTCTCAATGGAAGACATTGGAACCAGGTTTAATGTCACTGATCAATTGGCTTCTAGGTTCCCAGGAAATGGCGTTTCTCTCACTCTGGGGCTTCCCCACAATGAGAACCTCCCAATATCAGGAAGCCAACATGGATTCCTCTCACAGAATATTCATAATTTGGGTAGGAGACTTGAGATGGGAACCAATGGGAATGAGTTTTGTGTTATCAACACTTCACCTTCTTCTCACTCAGGAGCAAGTTATGAGAGTATTGACATTCAAAACAGGAAGAGGTTTGCTGCACAGTTATTGCCTGATTTTGTGGCCTGA 2226 0.4951 MATYFHGIQSSSSSPADGLQTLYLMNPNYHAPYSDAPHHPTTTPNMLLLNPNAAAATTTHHAHALNFSNLSHAPPLPSPNQQQQQHLVNIPGSANSDDNSRPSLFGSHEITTAFHGFSGCSASAVAPRVHYNLWGSVVDQTQPSSSAATPSSSSAGGGDMSPQMGFRRPSQQGLSLSLSSQQQQQQQQQQTVNYRSLSGEVAGGGGVGNSPSSVSNGISSVQSVILGSKYLKAAQELLDEVVNVGNKGIYKEELGEKVKGNRDSTSGVGEGSSGGGGGENSDAGKHVAEPTTAQRQELQMKKSKLVSMLDEVEQRYRQYHHQMQIVISSFEQAAGFGAAKSYTALALKTISKQFRCLKDAISSQIRATSKTLGEEDCLGVKVEGSRLRYVDHHLRQQRALQQLGMIQPNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEIKEQEHNNNGSDDNTIRSKESSKEVGSTSNAAPESGAIKLDQIKILQTKQECFNNHNTSPTEISANSSMSTSPMGGSLQSHTGFHLAGSSGMQRIPNKPRSSEMLNSSSSILSVDMEMKHGDHNNREANTKFIGIESHPKDGYPLMTGNTNHNGGYGAFSMEDIGTRFNVTDQLASRFPGNGVSLTLGLPHNENLPISGSQHGFLSQNIHNLGRRLEMGTNGNEFCVINTSPSSHSGASYESIDIQNRKRFAAQLLPDFVA* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1429 741 Pfam Homeobox KN domain 428 467 IPR008422 GO:0003677|GO:0006355
Dod10g1429 741 SMART HOX_1 411 475 IPR001356 GO:0003677
Dod10g1429 741 Coils Coil 295 315 - -
Dod10g1429 741 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 11 695 - -
Dod10g1429 741 SUPERFAMILY Homeodomain-like 412 478 IPR009057 -
Dod10g1429 741 MobiDBLite consensus disorder prediction 483 500 - -
Dod10g1429 741 ProSiteProfiles 'Homeobox' domain profile. 408 471 IPR001356 GO:0003677
Dod10g1429 741 Gene3D - 414 492 - -
Dod10g1429 741 SMART prehox3 219 363 IPR006563 -
Dod10g1429 741 MobiDBLite consensus disorder prediction 501 515 - -
Dod10g1429 741 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 11 695 - -
Dod10g1429 741 MobiDBLite consensus disorder prediction 141 193 - -
Dod10g1429 741 Pfam Associated with HOX 224 362 IPR006563 -
Dod10g1429 741 MobiDBLite consensus disorder prediction 259 297 - -
Dod10g1429 741 CDD homeodomain 411 472 IPR001356 GO:0003677
Dod10g1429 741 MobiDBLite consensus disorder prediction 483 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1429 Dod-Chr10 34566261 34570280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1429 1 741 Homeobox Transcription Factor Family AT2G35940 45.186 5.37e-142 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Dod10g1429 POX 9.4e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1429 - - gmx:100779075 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1429 10 34566261 34570280 Dod10g1429 10 34566261 34570280 ECH
Dod10g1429 10 34566261 34570280 Dod03g2305 03 53603958 53611033 PCT