Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1419 ATGGACGTCGATTCCTCGATGGTGCCGGTGCCGGAGCCCGATCACGATCCCGCGGCGGGTGCTGCTCCGGCAGCGGCTGCGGGAGAGGGGGAGCAGCTGCCGGAGCAGCCGTCGCCGGGCGGCAGATCTCCGGCGGTGCAGTCGCCGGTGCAGCAGCAGGCGCCGGGTCAGGTTCAGCAGAGTCCAGTGGTCGGACCGAGGCTGGCGCCGACTTACTCGCTGGTGAATGCGATTATCGAGAAGAAGGAGGACGGACCGGGGCCGCGGTGCGGCCACACGTTGACGGCGGTGGCGGCGGTCGGAGAGGAAGGGACGCCGGGGTACATTGGTCCCAGGCTGATTTTGTTCGGCGGTGCCACTGCTCTTGAAGGCAATTCTGCGGCTTCAGGGACTCCTTCATCTGCTGGAAATGCTGGCATACGTTTAGCTGGTGCGACAGCTGATGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGATAACTCCCTTTGGAGAACCTCCAACTCCAAGGGCTGCACACGTGGCAACTGCTGTAGGGACCATGGTGGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCTGAGGACCTTCATGTTCTTGATCTCACTCAGCAAATGCCCCGCTGGCATAGAGTATCTGTTCAGGGCCCTGGTCCAGGGCCACGTTATGGACATGTAATGGCTTTGGTGGGGCAGAGGTATCTTATGGCGATTGGAGGCAATGATGGAAAGCGACCTTTGGCTGATGTGTGGGCCCTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCTCCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGGTTGCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTTCCATTGCCAAGTGCATATGGACTTGCGAAGCACAGAGATGGTCGTTGGGAATGGGCAATTGCCCCGGGTGTCTCACCATCTGCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTCCACGTGTCTGGTGGAGCTCTTGGTGGAGGACGGATGGTAGAAGATTCATCAAGTGTAGCAGTATTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTCACCAGTCCAAGAACTGGTAGATACAGTGCCGATGCAGCCGGAGGAGATGCTGCTGTTGAGTTGACTCGGCGTTGTAGGCATGCAGCTGCTGCTGTTGGTGACCTAATTTTTATTTATGGTGGTTTACGTGGGGGAGTCTTGCTAGATGACCTACTTGTTGCTGTAGATCTTGCTGCTGCCGAAACAACTACTGCTGCTTCGCATGCTGCTGCTGCTGCAGCTGCATCTAATGTACAAGCAGGACGCTTAACTGGACGATATGGATTTGATGATAGGACAAGGCAAACAATGCCTGAAGCTTCTGCTGATGGTTCAGTTGTTTTGGGAAATCCAGTTGCTCCTCCAATGAATGGTGACATGTATACTGATATCAGCACTGAAAATGCCATGCTTCAGGGATCTCGGCGGATGAGCAAAGGAGTTGAGTATCTGGTCGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCTGCACTTGCCGCAGCCAAGGCACGGCAAGAGAATGGAGAAGTTGAATTGCATGACAGAGACGGGGGCCCCGATGCTACCCCAAGTGGGAAACAGACATCCTCCTTGATAAAGCCTGATTCTGCAGGGTCAAATAACATTGCTTCTGGTGGAGTTAGGCTGCATCACAGGGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCAATTGATCAGTTTGAAAATGAGGGCAGGCGAGTCAGTTATGGGACTCCAGAAAATGCAACTGCTGCTAGAAAATTATTAGACAGACAGATGTCTATCAATAGTGTGCCAAAAAAGGTCATAGCACATCTCTTAAAGCCTCGTGGATGGAAACCACCAGTTCGCCGGCAATTTTTCTTAGATTGCAATGAAATTGCCGATCTTTGTGATAGTGCCGAGCGGATATTTTCAAGTGAACCAAGTGTCTTACAGCTGAGGGCTCCAATTAAAATATTTGGTGATTTACATGGACAGTTTGGGGATCTCATGCGCCTTTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATCGGGGACAACACAGCTTGGAAACTATATCCCTTCTTCTTGCTTTGAAGGTTGAGTATCCCAACAATGTACATTTAATTCGTGGAAATCACGAAGCTGCAGATATTAATGCCCTTTTTGGCTTTCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGACGTGGCATCGGATGAACCGTCTGTTTAATTGGCTGCCTTTGGCAGCTCTGATTGAGAAAAAAATTATTTGCATGCATGGTGGCATTGGTCGTTCAATAAACCACGTGGAACAGATTGAGAACATTCAGCGTCCAATTCCAATGGAAGCAGGGTCAATTGTGCTGATGGATCTATTGTGGTCTGATCCCACAGAGAATGACAGTGTGGAAGGACTGCGACCAAATGCTAGAGGTCCTGGATTAGTTACTTTCGGGCCTGATCGTGTCATAGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGGGCACATGAATGTGTGATGGATGGGTTTGAGCGTTTTGCCCAGGGACATCTGATCACGCTCTTCTCAGCTACAAATTATTGTGGTACTGCAAATAATGCTGGGGCAATACTAGTTTTGGGTAGGGACCTTGTTGTGGTTCCTAAATTAATTCATCCATTACCACCTGCGATTTCGTCACCAGGAACGTCACCTGAACGGCATACTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGACCACCAACACCAACTAGAGGCCGTCCCCAAGGAGCAAATGACCGAGGTTCGCTCGCTTGGATATAG 3009 0.5032 MDVDSSMVPVPEPDHDPAAGAAPAAAAGEGEQLPEQPSPGGRSPAVQSPVQQQAPGQVQQSPVVGPRLAPTYSLVNAIIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQMPRWHRVSVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLPSAYGLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAVDLAAAETTTAASHAAAAAAASNVQAGRLTGRYGFDDRTRQTMPEASADGSVVLGNPVAPPMNGDMYTDISTENAMLQGSRRMSKGVEYLVEASAAEAEAISAALAAAKARQENGEVELHDRDGGPDATPSGKQTSSLIKPDSAGSNNIASGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRMNRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVIEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPGTSPERHTEDTWMQELNANRPPTPTRGRPQGANDRGSLAWI* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1419 1002 PIRSF STPPP_BSU1 36 1002 IPR012391 GO:0004721|GO:0009742
Dod10g1419 1002 MobiDBLite consensus disorder prediction 41 65 - -
Dod10g1419 1002 Gene3D - 69 197 IPR015915 GO:0005515
Dod10g1419 1002 Gene3D - 198 456 IPR015915 GO:0005515
Dod10g1419 1002 SUPERFAMILY Kelch motif 144 432 IPR015915 GO:0005515
Dod10g1419 1002 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1002 - -
Dod10g1419 1002 MobiDBLite consensus disorder prediction 546 560 - -
Dod10g1419 1002 Pfam Galactose oxidase, central domain 224 277 - -
Dod10g1419 1002 MobiDBLite consensus disorder prediction 1 65 - -
Dod10g1419 1002 MobiDBLite consensus disorder prediction 977 1002 - -
Dod10g1419 1002 Pfam Calcineurin-like phosphoesterase 699 906 IPR004843 GO:0016787
Dod10g1419 1002 CDD MPP_Bsu1_C 651 953 IPR041758 -
Dod10g1419 1002 ProSitePatterns Serine/threonine specific protein phosphatases signature. 768 773 IPR006186 GO:0016787
Dod10g1419 1002 PRINTS Serine/threonine phosphatase family signature 699 726 IPR006186 GO:0016787
Dod10g1419 1002 PRINTS Serine/threonine phosphatase family signature 895 915 IPR006186 GO:0016787
Dod10g1419 1002 PRINTS Serine/threonine phosphatase family signature 917 933 IPR006186 GO:0016787
Dod10g1419 1002 PRINTS Serine/threonine phosphatase family signature 734 761 IPR006186 GO:0016787
Dod10g1419 1002 PRINTS Serine/threonine phosphatase family signature 805 831 IPR006186 GO:0016787
Dod10g1419 1002 PRINTS Serine/threonine phosphatase family signature 767 791 IPR006186 GO:0016787
Dod10g1419 1002 SUPERFAMILY Metallo-dependent phosphatases 656 959 IPR029052 -
Dod10g1419 1002 MobiDBLite consensus disorder prediction 545 584 - -
Dod10g1419 1002 Pfam Kelch motif 330 376 IPR011498 GO:0005515
Dod10g1419 1002 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1002 - -
Dod10g1419 1002 MobiDBLite consensus disorder prediction 562 583 - -
Dod10g1419 1002 SMART pp2a_7 671 955 IPR006186 GO:0016787
Dod10g1419 1002 Gene3D - 635 961 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1419 Dod-Chr10 34477484 34490304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1419 663 898 Calmodulin-binding Proteins AT5G63870 29.412 9.03e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1419 - - gmx:100776048 1759.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1419 10 34477484 34490304 Dod10g1419 10 34477484 34490304 ECH
Dod10g1419 10 34477484 34490304 Dod03g2297 03 53424261 53439520 PCT