Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1414 ATGGGTGTCTCAGGGAAGTGGATTAAAGCCTTAATTGGTCAAAAGAAATCAGAAAAGCCAGAGTCTTCAGAGAAGGATGGAAATAAGGGCAAGTTTCGACATCAGAGAAAGCATTCCCCTGAATTTGACAATGGTAAACTTCAAAATGAGTTTGGCAATGATGCTACTCCACCTATTGGGGTTGACAATGGTCACTCAAACCTTGATGCCAATTATTCACCTTCTACTTCACAACAAGCACTTGATACTGCACATAATCAACAAATAATGAGGAGGGAATGGGCTGCAATATGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCTCTAAGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTGAGAAAACAAGCTGCAATAACGCTCCGTTGTATGCAAGCTTTGGTGAAGGTTCAGGCTCGTGTTCGGGCAAGGCGTGTTCGGTTGGCATTGGAAAGTCAAAATGCACAACAGAAACTTCAGCAACAGCTTGCAAATGAAGCTCGTGTTCGAGAAATAGAGGAAGGTTGGTGTGACAGTGTAGGATCTGTTGAAGAAATTCAAGCTAAAATATTGAAGAGGCAGGAGGCTGCAGCTAAACGTGAGAGAGCCAGGGCATATGCTTTATCCCATCAGTGGCAGGCAGGATCAAGACAGCAGGCAGTTTCTTCTGGATTTGAACCAGATAAAAGTAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAACCGCTTTGTAGACATTAATCTGAGGGATGGAGTGACAGTACGAGAAAATGGAGCTATGGATGGTAAAAATGGAACCAGAGCTAACGAGAAACCAATTCCATCAAACAATCAGCCAAACCTTGCAAATCAGAAAGCTGTACCCACCCTTTCTGATGGCTGTGGTTCTTCGCCTAGTAAGTCAGCAGGTTTGCAAGAATCATCAAACATTCAGCCTGTTAAGCCAAACTCTAAGGCAAATGTTGAAAATACTATTGAAGAAGCTAACTCAAAACCTGGGATTGGGTCGAGATCTCGCAGTAATCCGAAGGAGAGAACCTCCCAGGCAGATAAGCAGGCCAAAAAACGATTATCCCTGCCTAACAGTGCAGGGGGAGGTCCTGGGGCTCAAACAGCCAGACATCCTATTAGAACTAATGTGAAAGGGACACTCAGCACGCAAAAGCCTGGTAGGGACAAACCTAAGACCAGTGGAAGAGGGGATTTAAATGCTACAAAATCAGTTCCACAGCATGCGGGCATGTAG 1296 0.4514 MGVSGKWIKALIGQKKSEKPESSEKDGNKGKFRHQRKHSPEFDNGKLQNEFGNDATPPIGVDNGHSNLDANYSPSTSQQALDTAHNQQIMRREWAAICIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVKVQARVRARRVRLALESQNAQQKLQQQLANEARVREIEEGWCDSVGSVEEIQAKILKRQEAAAKRERARAYALSHQWQAGSRQQAVSSGFEPDKSSWGWNWLERWMAVRPWENRFVDINLRDGVTVRENGAMDGKNGTRANEKPIPSNNQPNLANQKAVPTLSDGCGSSPSKSAGLQESSNIQPVKPNSKANVENTIEEANSKPGIGSRSRSNPKERTSQADKQAKKRLSLPNSAGGGPGAQTARHPIRTNVKGTLSTQKPGRDKPKTSGRGDLNATKSVPQHAGM* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1414 431 SMART iq_5 91 113 IPR000048 GO:0005515
Dod10g1414 431 SMART iq_5 114 135 IPR000048 GO:0005515
Dod10g1414 431 MobiDBLite consensus disorder prediction 286 359 - -
Dod10g1414 431 MobiDBLite consensus disorder prediction 12 44 - -
Dod10g1414 431 PANTHER IQ-DOMAIN 5-RELATED 2 386 - -
Dod10g1414 431 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Dod10g1414 431 PANTHER IQ-DOMAIN 5-RELATED 2 386 - -
Dod10g1414 431 Gene3D - 93 134 - -
Dod10g1414 431 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Dod10g1414 431 MobiDBLite consensus disorder prediction 393 408 - -
Dod10g1414 431 MobiDBLite consensus disorder prediction 273 431 - -
Dod10g1414 431 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Dod10g1414 431 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1414 Dod-Chr10 34442779 34448001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1414 1 390 IQD Protein Family AT3G22190 57.500 3.08e-114 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1414 - - gmx:100787148 585.104