Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1408 ATGAACAGCTCAAACAATGCAATAGAAAGTGAGCAAACAAGAGGGATGATAGAAAACAACAGTTATATTCAGAGAGCAATCAAGGCCAGCTGTTACTCGAAATACATACAGCAACAAAATCGAAACAACAAAACATCCAAAAAAGAAAAAAAAATCATACTATTGATTATGGATCAATATCGTGCCCAGCCAAAGAATTCTCTCTCTCTCTCTCTCTCTGTGTCTCTTCCTCCTTGTGATCTGCCTGTAAATCTTTCTAAGCACACGCAAAGGACACTCACAAATTTTGAGAATATAATGTCATCAATGGACATGGTGGCAACCGAACGTGTCTGTTATGTTTACTGCAACTTCTGCAACACCACTCTAGCGGTTAGTGTTCCATGCAACAGCTTGCTCACCCTAGTGACAGTTAGATGTGGGCATTGTGCCAATCTGCTATCAGTTAACATGGGAGCCTCACTTCAAACATCACCTCCTCAAGACCCTCAGTCACAGAAACAGCACCTGATGAGCTTCCAAGAGCCAAGCAGCAAGGAACATGGATCATCATCTTCAAAATACAACGAATCATCACCCACATTTGAGTCTGTAGACCATGAGCAACCTAGGATTCCTCCCATTCGTCCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAGGAAATCCAAAGAATTAAGGCTAGTAATCCAGACATCAGCCACAGGGAAGCTTTCAGCACAGCCGCCAAAAATTGGGCACATTTCCCTCACATTCACTTTGGGCTAAAGCTGGATGGCAACAAACAAGCAAAGTTGGACCATGGGGAGGGAACTCAAAAGTCTAACGGATTCTACTGA 858 0.4289 MNSSNNAIESEQTRGMIENNSYIQRAIKASCYSKYIQQQNRNNKTSKKEKKIILLIMDQYRAQPKNSLSLSLSVSLPPCDLPVNLSKHTQRTLTNFENIMSSMDMVATERVCYVYCNFCNTTLAVSVPCNSLLTLVTVRCGHCANLLSVNMGASLQTSPPQDPQSQKQHLMSFQEPSSKEHGSSSSKYNESSPTFESVDHEQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDHGEGTQKSNGFY* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1408 285 PANTHER PROTEIN YABBY 6-RELATED 103 285 IPR006780 GO:0007275
Dod10g1408 285 MobiDBLite consensus disorder prediction 155 198 - -
Dod10g1408 285 Gene3D High mobility group box domain 200 258 IPR036910 -
Dod10g1408 285 SUPERFAMILY HMG-box 207 255 IPR036910 -
Dod10g1408 285 MobiDBLite consensus disorder prediction 155 218 - -
Dod10g1408 285 Pfam YABBY protein 107 262 IPR006780 GO:0007275
Dod10g1408 285 PANTHER AXIAL REGULATOR YABBY 2-RELATED 103 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1408 Dod-Chr10 34372510 34384785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1408 102 285 C2C2-YABBY Transcription Factor Family AT1G08465 68.254 3.42e-83 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Dod10g1408 YABBY 1.7e-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1408 K25796 - gmx:100500026 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1408 10 34372510 34384785 Dod03g2286 03 53281212 53289641 PCT