Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1394 ATGGCAAGAGGCATAGGGGGTGGACTCTCCATTGATTCAGATCCAATTGGGAGCTTCTTCCTCCACACCCCAATATCCACAACAACAACAACACTCCTCAACTCTTTCACTTCTCAAAAAGAACATAGCCAACCCCAAGTGGAAGAAGAACTTATGGATGCCACAGTTAGCGCCAAGAGGTCTCCATCAACCACCACCACCACCACCACCTCCATGACACCCTTCCAAGTCAACCTCAGTTGCTCCCAACACCATGAAAGCCCTGCCTCCCCTCAACTTTCACATGACAAGAGACCCCTCCTTGATGAGATGGACTTCTTCTCTGATCACAACAACAACAAGAGCAATATCCTTCATGGTGTGGACAACCTTGCCTCTGCCTCCTCCTCTGCCCCTCCCCATGATCATCATCACCACCACCCCACCAATCCTGATATCTTGGAATTCAAAGTAAACACTGGTCTGAATCTTCTTACTACCAACACTAGCAGTGATCAATCCATGGTGGACGATGACATATCAACTAATTCAGTGGACAAAAGAGCTAAGACTGAGCTGGTTGTTCTTCAAGCCGAGCTCGAACGAATGAAGGTGGAGAATCACCGGTTGAGGGACATGCTTGATCATGTTAACACAAACTACAACGCCCTTCAGATGCACTTGGTTAACTTGATGCAAGACCAGAAGGCCGAGGAAGAACAACACCACCAAGAACCTTTTGATGGAAAACTAGAAGAGAAGAAGCAAATGGTGCCAAGGCAGTTTATGGATCTTGGGTTGGCTATTAATAATAATGCTGATGTTGCTGATGAGCCTTCACTGTCTTCATCAGTGGGAAAGTGTCAGGAGCGGTCAAAGTCACCAGCAAATAACTTGGAGGTGGCTTCCAAGGAGCTTGGTAACAGGAAGAAGAATATTGGAAACAATGCAAGCGGTGAAGGGGTTGTGTTTGATCATGACAAGAAGGGACTTGGTAGTAGAGGGATTGAAAGAGAGGATAGCCCCTCAGACGAAGGTGTTGCTGCTAATAATAAGGTCCCAAGATTGAGTCCTCCTAGTCCTAAAAATGTTGATCAAGCTGAGGCCACCATGAGGAAGGCTAGAGTCTCAGTTAGAGCTCGATCAGAGGCCCCCATGATCACTGATGGGTGTCACTGGCGAAAGTATGGGCAGAAAATGGCAAAAGGGAACCCATGTCCTAGAGCATATTACAGATGCACCATGGCTGCAGGTTGCCCTGTAAGAAAACAGGTGCAAAGGTGTGCTGAAGACACAACAATACTAATAACAACATATGAAGGAAACCACAACCACCCTTTGCCTCCAGCAGCTATGGCAATGGCACAAACAACGTCCTCAGCTGCAAGGATGCTCCTGTCAGGATCAATGTCAAGTGCTGACAGCCTAATGAATGCAAACTTCCTGACAAGGACACTCCTCCCTTGCTCTTCAAGCATGGCAACAATCTCAGCATCAGCACCATTCCCAACTGTTACATTGGATATGACACAGTCCCCAAACCCATTACAGTTCCCAAAGCACCCAAGCCAGTTCCAAATCCCTTTTGGTGTGCCTCACAACTTTTCCAATTCAGCAGCCTCACTGCTGCCGCAGATATTAGGCCAGGCACTGCACAACAACCAGTCAAAGTTCTCTGGGCTTCAAGTGTCTCAGGATGCTTCAGACCCTTCTTCCCAATTGGCTAATCAATCTCAACAAGCACCACCACCATCACATCTTGCTGACACTGTTAGTGCTGCCATTGCAGCTGACCCCAACTTCACTGCAGCTTTGGCAGCAGCTATCACTTCCATCATTGGAGGTGCACAGCAAAACAACAACAGTACTACTAGTACTAACAATGGCAACACTTCATCCAACAACAACAATGGCAATATTACATCAACCAACAATACCAATGGAAGCAATAAAATCAACAGTTCCAATTTCTCAGGGAACTAG 1962 0.4689 MARGIGGGLSIDSDPIGSFFLHTPISTTTTTLLNSFTSQKEHSQPQVEEELMDATVSAKRSPSTTTTTTTSMTPFQVNLSCSQHHESPASPQLSHDKRPLLDEMDFFSDHNNNKSNILHGVDNLASASSSAPPHDHHHHHPTNPDILEFKVNTGLNLLTTNTSSDQSMVDDDISTNSVDKRAKTELVVLQAELERMKVENHRLRDMLDHVNTNYNALQMHLVNLMQDQKAEEEQHHQEPFDGKLEEKKQMVPRQFMDLGLAINNNADVADEPSLSSSVGKCQERSKSPANNLEVASKELGNRKKNIGNNASGEGVVFDHDKKGLGSRGIEREDSPSDEGVAANNKVPRLSPPSPKNVDQAEATMRKARVSVRARSEAPMITDGCHWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDTTILITTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSADSLMNANFLTRTLLPCSSSMATISASAPFPTVTLDMTQSPNPLQFPKHPSQFQIPFGVPHNFSNSAASLLPQILGQALHNNQSKFSGLQVSQDASDPSSQLANQSQQAPPPSHLADTVSAAIAADPNFTAALAAAITSIIGGAQQNNNSTTSTNNGNTSSNNNNGNITSTNNTNGSNKINSSNFSGN* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1394 653 MobiDBLite consensus disorder prediction 270 294 - -
Dod10g1394 653 ProSiteProfiles WRKY domain profile. 375 441 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod10g1394 653 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 86 632 IPR044810 GO:0003700
Dod10g1394 653 MobiDBLite consensus disorder prediction 609 653 - -
Dod10g1394 653 SMART WRKY_cls 380 440 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod10g1394 653 MobiDBLite consensus disorder prediction 124 146 - -
Dod10g1394 653 MobiDBLite consensus disorder prediction 270 357 - -
Dod10g1394 653 Pfam WRKY DNA -binding domain 382 439 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod10g1394 653 SUPERFAMILY WRKY DNA-binding domain 373 441 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod10g1394 653 Coils Coil 179 213 - -
Dod10g1394 653 MobiDBLite consensus disorder prediction 552 579 - -
Dod10g1394 653 Gene3D WRKY domain 365 442 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod10g1394 653 MobiDBLite consensus disorder prediction 315 338 - -
Dod10g1394 653 PANTHER OS05G0567200 PROTEIN 86 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1394 Dod-Chr10 34203295 34206195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1394 151 608 WRKY Transcription Factor Family AT1G62300 52.017 8.83e-132 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod10g1394 WRKY 5.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1394 - - gmx:100127384 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1394 10 34203295 34206195 Dod03g2270 03 53048635 53052137 PCT