Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1393 ATGATGGAGTGGACCAGAGGCCACATCATAGGCCAAGGCTCTTCAGCCACCGTCTACGCCGTCACCACCACCTCCGACGCCGCCGTCTCCGCCGTCAAGTCATCGGAGCTCTCACAGTCACAACACCTCCAAAGAGAGCAAAAAATCCTTTCCACTCTGTCCTCACCCCACATAGTAGCCTACAAAGGCTACAACATCACCAAAGAAAACAACAATCTCATGTTCAACCTCTTCATGGAGTACATGCCCTTTGGCACTCTCTGTCAGGCCACGCGCCGCCACGGTGGCCGCCTCAGCGAGCAGGTGATCGCGCACTACACGTGGCAAGTTCTCAAGGGGTTGGAGTACTTGCACTCAAGAGGGTTGGTGCATTGTGACATAAAGGGTAGCAACATCCTTGTTGGTAATGAAGGTGTTGTCAAAATTGCCGACTTTGGCTTCTGCAAGAGTGTCAATGACTCCACGGCGGCGCCGGTGGCCGGAACTCCGGCGTTCTTGTCACCGGAGGTGGCGCGCGGGGAGGAGCAGGATTTTCCTTGTGATGTTTGGGCTGTTGGGTGTACTGTGGTTGAGATGGCCACTGGTTGTTCACCTTGGCCTAATGTTTGGGACCCTTTGACAGTTCTTTACCGTGTTGGATATTGCAGTGATGTTCCTGAGATTCCGAGGTTTCTGTCTGATGAAGCAAAGGATTTCTTGGGGAAGTGCTTTTTGAGGAATCCGAGGGAGAGGTGGAGTGCCACTCAGCTTTTGAGGCATCCATTTCTTGTGGGGTTCAATTCAAAGGGTGGCGATGAGGGTGTTCTTGTTGTTGAATCCAATTCATGTTCTCCTACGAGCATTCTTGAGAATGGAATTTGGAATTCTGTTGAGGAATCAGAATGCCCTCTCATTGTTGGGGATTTGGTTCATGGAGGGTTTGAGGATTCTGCTTCTGATAGGATCAGGAAACTGGCTTTATGTTCTGGGGTTCCTAGTTGGAGTTGGAATGATCAGAATTGGATCACATCTAGAGGGAATGGAGCTGAAGTTGAGGGTTCTTGCATTGGTGGATTAATGGCAGCTTCAAATTCAGTTAGTGATGATGATTGGAGTGATCTGGATGAGCTACAGAGAAGCGATGTTAGTAATTTTAGTGATGTTAGCAATAGAATTAGTGGTAATATTTTTGAGGATTTTATTAAATGTAGGGATGTTAGTGTTGTAGCCAGTAGTAATCTCAATTTTGAGAGAGATATTGCTGAGATGCAAATCCCTTTAACATTAGATATTTTATAA 1278 0.475 MMEWTRGHIIGQGSSATVYAVTTTSDAAVSAVKSSELSQSQHLQREQKILSTLSSPHIVAYKGYNITKENNNLMFNLFMEYMPFGTLCQATRRHGGRLSEQVIAHYTWQVLKGLEYLHSRGLVHCDIKGSNILVGNEGVVKIADFGFCKSVNDSTAAPVAGTPAFLSPEVARGEEQDFPCDVWAVGCTVVEMATGCSPWPNVWDPLTVLYRVGYCSDVPEIPRFLSDEAKDFLGKCFLRNPRERWSATQLLRHPFLVGFNSKGGDEGVLVVESNSCSPTSILENGIWNSVEESECPLIVGDLVHGGFEDSASDRIRKLALCSGVPSWSWNDQNWITSRGNGAEVEGSCIGGLMAASNSVSDDDWSDLDELQRSDVSNFSDVSNRISGNIFEDFIKCRDVSVVASSNLNFERDIAEMQIPLTLDIL* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1393 425 Pfam Protein kinase domain 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1393 425 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 361 - -
Dod10g1393 425 ProSiteProfiles Protein kinase domain profile. 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1393 425 SUPERFAMILY Protein kinase-like (PK-like) 4 261 IPR011009 -
Dod10g1393 425 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Dod10g1393 425 Gene3D Transferase(Phosphotransferase) domain 1 2 281 - -
Dod10g1393 425 CDD STKc_MAPKKK 3 256 - -
Dod10g1393 425 PANTHER MAP KINASE KINASE KINASE 2 361 - -
Dod10g1393 425 SMART serkin_6 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1393 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1393 Dod-Chr10 34182694 34184045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1393 2 290 MAP Kinase Kinase Kinase AT2G32510 53.584 1.32e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod10g1393 Pkinase 4.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1393 K20716 - gmx:100797801 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1393 10 34182694 34184045 Dod10g1393 10 34182694 34184045 ECH
Dod10g1393 10 34182694 34184045 Dod03g2269 03 53034878 53036199 PCT