Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1388 ATGAAGGGTCCTTATTTGAAGGTTGATTTTCACAAAGGTGCTATGGTTGAGGGTGCGTTGACTTTTGCTCTTAACTTGGCTATCCTTCTTGTCATGCTAAAGGGTCCTAAGAACCCTTTGCTGAAGGTGTATTTGCTTGCTGTGGCAACTGTGAGTTTGGTTATTGCTGGTTCTGGGTATACAGGGCCTTCCATGAACCCTGCCAATGCATTTGGATGGGCCTATGTGAACAAGAAGCACAATACTTGGGAGACGTTTTATGTTTATTGGCTATGTCCTTTCATAGGTGCAATCTTGGCTGGTTCGCTCTACAAGTTTCTGTTTATCAAGCCGGTCAAGCAGAAGAAAGCTTGA 354 0.4407 MKGPYLKVDFHKGAMVEGALTFALNLAILLVMLKGPKNPLLKVYLLAVATVSLVIAGSGYTGPSMNPANAFGWAYVNKKHNTWETFYVYWLCPFIGAILAGSLYKFLFIKPVKQKKA* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1388 117 Gene3D Glycerol uptake facilitator protein. 1 116 IPR023271 -
Dod10g1388 117 PRINTS Major intrinsic protein family signature 47 69 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod10g1388 117 PRINTS Major intrinsic protein family signature 87 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod10g1388 117 PRINTS Major intrinsic protein family signature 16 34 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod10g1388 117 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 117 - -
Dod10g1388 117 SUPERFAMILY Aquaporin-like 4 111 IPR023271 -
Dod10g1388 117 PANTHER AQUAPORIN SIP1-1 1 117 IPR044222 GO:0015250
Dod10g1388 117 Pfam Major intrinsic protein 9 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1388 Dod-Chr10 34142479 34142832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1388 1 108 Major Intrinsic Protein MIP AT3G04090 52.778 8.46e-40 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1388 K09875 - ming:122078270 187.193