Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1386 ATGGTGAGAATAATCTCCAACAACAACAACAATAGTGAAGCCAAAGAGGACATTGTTGATGTTAACGAAGAATCTAGAGATGAAGGCGAGGCGGCGAGTGCTCGAATGAAGAAAGGGCCTTGGATGCCCAGAGAAGACTCGATCCTGATAGAGTACGTGAAGAAGAATGGTGAAGGGAATTGGAACTCTGTGCAGAAGAATTCTGGGTTGTCAAGGTGCGGCAAAAGTTGTAGGCTTAGATGGGCCAATCATCTTAGGCCTAATCTGAAGAAGGGTGCATTTTCTGAGGAAGAAGAGAAGAGCATCATCGAGCTTCATGCTAAGCTTGGAAACAAATGGGCTCAAATGGCTGCGCAGCTACCTGGGAGGACAGACAATGAAATAAAGAATTTTTGGAATACAAGAATGAAAAGGCTCCAGAGAGCAGGGTTACCCCTTTATCCTCCACAAGTTCAAGATGAAGCCAATGCATTCCTTCTACAGAAACAACACTACTTTGAACAACCTTTCTCTTCATCTTCATCATTTTCTTTGCTCCTATCTTCATGCTACCCTAAAAAGCTCAATGAACCAACCCATTTTTCTGCCTTGAATCCTCTCCCAAATCCACCTAATAATAATCCTGCTTGCTACACCAATCCAAACAATGGCAGCAGTAATAATGCAAATCTTGCTCTGCCATTATCCCCTATTTCTCCTTATGGATCATCACCATCATCATCCTCCACTTTGTTCAACCTGCAGAGTTTTGCTCCCAATTCCACAAATTCATTGGTGCTAGGCTCGAGTACTGAGATATCTCCAAGCCAATCACCACCTGACTCGGCAACTCCTGCTTCATCTTATACTAGTGGTGTTGATGGCTTGATGTGGAGTTCAAGCATGGTTAATGACTACTATGAAGTTGTACCATTATCCCCTCAAGGTAACAGTGGCCTTTTGGATGCTGTGGTCGTGGGGGCTCAAGGCCTTTCTCGCAATGACAAGTCAAAGAGTGAGGATTCAACCTTTGCAAGGAATAAGTTATTATCTTGTAAGAGGAAAAGCATGGCATTAGAGGGATATGCTAATGAGGAGGAAGATCACACTGCTATGTTTTTGGAGTCAACAACAATGAAGAAGAACACTGGAGGCACTAATAACATTGAAAATCAAAGGGTTATTGATTTCAGCCCTTCTCAATTGTCAACAGCCTACTCATCAATTTTCCCTCACATGCCATCGCCAGAGTGGTACCGTGGAGGGGGTAGTCAATCATTGGGACTTGAAACTCAAGCCAATGCGTCACCTGGCCCCACAGATCAAGAATTTGCTTGGGGTCTTGGGCTAGTTGGAACATGGGCATATGCTAATAATGAGTGGCAATTATAG 1371 0.4369 MVRIISNNNNNSEAKEDIVDVNEESRDEGEAASARMKKGPWMPREDSILIEYVKKNGEGNWNSVQKNSGLSRCGKSCRLRWANHLRPNLKKGAFSEEEEKSIIELHAKLGNKWAQMAAQLPGRTDNEIKNFWNTRMKRLQRAGLPLYPPQVQDEANAFLLQKQHYFEQPFSSSSSFSLLLSSCYPKKLNEPTHFSALNPLPNPPNNNPACYTNPNNGSSNNANLALPLSPISPYGSSPSSSSTLFNLQSFAPNSTNSLVLGSSTEISPSQSPPDSATPASSYTSGVDGLMWSSSMVNDYYEVVPLSPQGNSGLLDAVVVGAQGLSRNDKSKSEDSTFARNKLLSCKRKSMALEGYANEEEDHTAMFLESTTMKKNTGGTNNIENQRVIDFSPSQLSTAYSSIFPHMPSPEWYRGGGSQSLGLETQANASPGPTDQEFAWGLGLVGTWAYANNEWQL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1386 456 CDD SANT 40 85 IPR001005 -
Dod10g1386 456 SMART sant 90 138 IPR001005 -
Dod10g1386 456 SMART sant 37 87 IPR001005 -
Dod10g1386 456 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 24 421 - -
Dod10g1386 456 CDD SANT 105 134 IPR001005 -
Dod10g1386 456 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Dod10g1386 456 SUPERFAMILY Homeodomain-like 35 132 IPR009057 -
Dod10g1386 456 MobiDBLite consensus disorder prediction 195 216 - -
Dod10g1386 456 ProSiteProfiles Myb-like domain profile. 33 85 IPR001005 -
Dod10g1386 456 Gene3D - 37 90 - -
Dod10g1386 456 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 85 IPR017930 -
Dod10g1386 456 MobiDBLite consensus disorder prediction 261 283 - -
Dod10g1386 456 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Dod10g1386 456 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Dod10g1386 456 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Dod10g1386 456 Gene3D - 93 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1386 Dod-Chr10 34077890 34080404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1386 36 413 MYB Transcription Factor Family AT2G32460 39.450 1.44e-69 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod10g1386 Myb_DNA-binding 3.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1386 K09422 - gmx:100798860 409.068