Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1366 ATGGCTGACATGGATCGCTCTTCTGATCAAGTTTCTGCAGACTCTACAGAGCAAATATCAGATCAAGCCTGCAAGGTTGAATTTTCTGAGGATGAGGAGACTCTTATTACCAGGATGTATAAACTAGTTGGGGAGAGGTGGTCTTTAATTGCTGGAAGAATTCCTGGAAGAACAGCTGAGGAAATAGAAAAGTATTGGACTTCAAGATACTCAAGTAGCGAATGA 225 0.4133 MADMDRSSDQVSADSTEQISDQACKVEFSEDEETLITRMYKLVGERWSLIAGRIPGRTAEEIEKYWTSRYSSSE* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1366 74 MobiDBLite consensus disorder prediction 8 23 - -
Dod10g1366 74 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 12 73 - -
Dod10g1366 74 MobiDBLite consensus disorder prediction 1 25 - -
Dod10g1366 74 Pfam Myb-like DNA-binding domain 25 67 IPR001005 -
Dod10g1366 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 12 73 - -
Dod10g1366 74 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Dod10g1366 74 CDD SANT 27 66 IPR001005 -
Dod10g1366 74 SMART sant 24 72 IPR001005 -
Dod10g1366 74 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 74 IPR017930 -
Dod10g1366 74 SUPERFAMILY Homeodomain-like 26 70 IPR009057 -
Dod10g1366 74 Gene3D - 27 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1366 Dod-Chr10 33836138 33837408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1366 19 71 MYB Transcription Factor Family AT5G14750 47.170 3.48e-15 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod10g1366 Myb_DNA-binding 5.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1366 - - dzi:111287942 118.242