Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1356 ATGATCATGGAACCCCAGTGTCAATTTTGTGGGGTTGTAAGAGCTGTGGCTTATTGCAAATCAGACTCTGCACGCCTCTGTTTGCACTGCGATAGATACGTGCACTCTGCAAATTCCTTGTCACGCAGGCATGCGCGTTCTCTCCTATGTGATAAGTGCAATTTTCAGGCTGCAACTGTTCGATGCATGGATCATAAGCTCTCTGTGTGTCAAGGTTGTGAATGGAATCGGAATGAGTGCTTGTTGTTGGGACATAGGCGCCTCGCATTGAATTGTTATACGGGTTGTCCCTCTTTCGTCGAGTTGTCTAGGATTTGGTCCAACGTGTTTGATGCTAACTCGTCATGTGGTGCTTTGGAATCAATTTGTACATTGTCAAGAAATGACAGCATCAATAGCAAGTGTGTTGAGCAACCTGAAAATGATGGTTCCTTTGGTGTTGTGAGTGACAAGCTGAAGGGAATAGAACCATGTGTCAAATATGAGCCTTGGATGGGGCAATCTCCCATCATGCCACCAAATCCAGATTGTATGACTTACTGCAAAGATCAAGCACTTTTCTTTCCTCAAGATTCAAACCAGCCAGAGCTGCAGGGATGTCCTAGTTTCAAGGAGCTAGGAATTCATGAGGGAAATGGTCTCTATGAAGGCCTCAGTGTGGATGATGTTCAACTAAACTTTGAAAATGCTGATGAAATATTTGGATGCTCTCAAGTTGCCACAAGATACAACCTTGAGGATGGAGGAGTGGACTCTCTATTAATGGATGAAAACATGTCATTCACAGAATCTAAATGCCTTATTAAGAGTTCCATGGAGGCATCATCATCAGTCCAACAAGATTCTGTGCCTTTTCAGCCTTCTAGGGCTGGGTCATCCAGTGTGATGCAGGCCATCAATAGTAATGCAAGTGGTGCACTTGTGAATCCTAGTTGCAACAGAGACATCAATCTGGGATTTCCTCAGGGTCAAGTTCACTCAAGCATATCAATTCAGTTATCCAACATCACTGGTGAAAATAGTACAACTGATTATCAAGATTGTGGGTTGTCACCACCAGTGTTTCTGACAGGTGAATCCCCCTGGGAATCAAATTTGGGGAGTAAAAGCCCGCGAACAAGGGATAAAGCTATAATGAGATACCATGAAAAAAGGAAAACTCGAACGTTTGGTAAGCAAATAAGATATGCATCTCGCAAAGTAAGGGCTGATACAAGAAAACGTGTTAAAGGTAGATTTGTTAAAGCAGGTGAAGAGTATGATTATGATCCTCTTCCGAACAGCAAGGATGAATAA 1296 0.4298 MIMEPQCQFCGVVRAVAYCKSDSARLCLHCDRYVHSANSLSRRHARSLLCDKCNFQAATVRCMDHKLSVCQGCEWNRNECLLLGHRRLALNCYTGCPSFVELSRIWSNVFDANSSCGALESICTLSRNDSINSKCVEQPENDGSFGVVSDKLKGIEPCVKYEPWMGQSPIMPPNPDCMTYCKDQALFFPQDSNQPELQGCPSFKELGIHEGNGLYEGLSVDDVQLNFENADEIFGCSQVATRYNLEDGGVDSLLMDENMSFTESKCLIKSSMEASSSVQQDSVPFQPSRAGSSSVMQAINSNASGALVNPSCNRDINLGFPQGQVHSSISIQLSNITGENSTTDYQDCGLSPPVFLTGESPWESNLGSKSPRTRDKAIMRYHEKRKTRTFGKQIRYASRKVRADTRKRVKGRFVKAGEEYDYDPLPNSKDE* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1356 431 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 427 - -
Dod10g1356 431 ProSiteProfiles CCT domain profile. 374 416 IPR010402 GO:0005515
Dod10g1356 431 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 4 427 - -
Dod10g1356 431 SMART bboxneu5 2 49 IPR000315 GO:0008270
Dod10g1356 431 CDD Bbox1_BBX-like 7 49 - -
Dod10g1356 431 ProSiteProfiles Zinc finger B-box type profile. 45 90 IPR000315 GO:0008270
Dod10g1356 431 Pfam CCT motif 374 416 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1356 Dod-Chr10 33729212 33732126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1356 3 424 C2C2-CO-like Transcription Factor Family AT3G21880 39.294 4.01e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod10g1356 CCT 8.4e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1356 - - gmx:100804738 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1356 10 33729212 33732126 Dod10g1356 10 33729212 33732126 ECH