Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1355 ATGTGCAAAGGTGCAGAAGGAAAAAGGCATGGTGGTGGTTTCAGTAGGAGCTTCCGACCTGAAAAAGGGGCTTCATGTGGTGCAATAAGAGGCTTTTCTAATACATGCTGTGAGCTATGCGGGTTAAGGGCTTCAGTGTATTGCCAAGCTGATGATGCATATCTATGTAGAAAATGTGACAAATGGGTTCATGAAGCCAATTTTTTGGCCCTTAGGCACATTAGGTGCTTTCTCTGCAACACATGTCACAACCTTACAAGAAGATATCTCATTGGTGCCTCATTAGAGGTTGTTCTTCCAGCCAATGTGAAATTGGCTTCCAGCAAGTCAACAGCAATAGTATCTCAATCCACAGTTTTGATCAAGCTCACTAATCTGATTGAAAAGAGAATCAATGAAGAGTTTCCAAAGTATGTTGTTTGCTATCCTTGGACATGGCTTAAGAGGATGGAGTAA 456 0.4189 MCKGAEGKRHGGGFSRSFRPEKGASCGAIRGFSNTCCELCGLRASVYCQADDAYLCRKCDKWVHEANFLALRHIRCFLCNTCHNLTRRYLIGASLEVVLPANVKLASSKSTAIVSQSTVLIKLTNLIEKRINEEFPKYVVCYPWTWLKRME* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1355 151 CDD Bbox1_BBX-like 36 78 - -
Dod10g1355 151 PANTHER B-BOX ZINC FINGER PROTEIN 29 28 106 - -
Dod10g1355 151 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 28 106 - -
Dod10g1355 151 SMART bboxneu5 32 78 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1355 Dod-Chr10 33726112 33728367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1355 1 101 C2C2-CO-like Transcription Factor Family AT3G21890 48.598 4.88e-24 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1355 - - gmx:100305571 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1355 10 33726112 33728367 Dod10g1355 10 33726112 33728367 ECH
Dod10g1355 10 33726112 33728367 Dod03g2219 03 52189882 52191031 PCT