Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1347 ATGGACATAGATTCCTCAGGGGCTTCCTCTTGGCTCTATGATTATGCCTTTGATCATATCTCTGTTGCTTCTGGAGCTGAGTTCATGGCTGCAGCTGACTGTGCTGCTTTCAACTGGGTCATGCCTCAGACTCAGAATCACACCACCTTCAAGTGCCCTCCTTCCAATATGAGCTTTGAAATGGAATACTCACTGGATTCGACTGTCCTGGAAGGTGGCCCCCCTTCAAAGCGGTTGAGGACTGAATCATGTGCATCTGGATCCAAGGCATGTCGTGAGAAACTACGAAGGGATAAACTGAATGAGAGGTTTCTGGAATTGAGTTCTATCTTGGAGCCTGGCAAGCTGCCCAAAACAGACAAGGTTGCTATGTTAAGTGATGCAGTTCGAGTGGTAACCCAATTAAGAAATGAAGCCGAAAAGCTGAAGGAAATGAATGATGAACTGCTTGAAAAAGTTAAAGAACTGAAGGCTGAGAAGAATGAGCTTCGTGATGAGAAGAATAGGCTGAAGGTAGATAAAGAAAAGCTTGGAGCAGCAGGTCAAATTGACAAATGCACAGCCCAGCTTCCTGTCTCATCCTCCGGCTACAAAAGGGCAAGCTGGTAA 609 0.4598 MDIDSSGASSWLYDYAFDHISVASGAEFMAAADCAAFNWVMPQTQNHTTFKCPPSNMSFEMEYSLDSTVLEGGPPSKRLRTESCASGSKACREKLRRDKLNERFLELSSILEPGKLPKTDKVAMLSDAVRVVTQLRNEAEKLKEMNDELLEKVKELKAEKNELRDEKNRLKVDKEKLGAAGQIDKCTAQLPVSSSGYKRASW* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1347 202 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 3 178 - -
Dod10g1347 202 Pfam Helix-loop-helix DNA-binding domain 88 135 IPR011598 GO:0046983
Dod10g1347 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 84 135 IPR011598 GO:0046983
Dod10g1347 202 PANTHER BHLH TRANSCRIPTION FACTOR 3 178 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Dod10g1347 202 Coils Coil 125 180 - -
Dod10g1347 202 Gene3D - 88 179 IPR036638 GO:0046983
Dod10g1347 202 CDD bHLH_AtILR3_like 89 164 - -
Dod10g1347 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 90 160 IPR036638 GO:0046983
Dod10g1347 202 SMART finulus 90 141 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1347 Dod-Chr10 33662992 33674602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1347 63 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51070 60.345 4.62e-42 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod10g1347 HLH 4.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1347 - - gmx:100806838 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1347 10 33662992 33674602 Dod10g1347 10 33662992 33674602 ECH