Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1344 ATGGAATTGACAAGACCTGGTTATGCGGTTATTTATGTCATTCTTCTTTGCGCCTTGGCCAAAACCGGCTCTGAGGGCAAGAGGTGGAAACCACACGAGTTTTATGGAGATCATGGTGTCTTGTCATCTTCCCTTCACTTGCAAGGAAAAAGGGAAGAGCAGGCGTGGAAACATTGCAGGAAAGAATTATTAGAGAGGAACAATGATATTAAAGACTTTGACTTTGAAAAAGCAACAAAATTTCTGCCTCCCAATTTGAAACAAAACTTTCTGGATTGCATAAGAAAGATAGCTGCTCGTCCAAGTCCTGTCTCAGAGGATCAGGAACATCAGCTGAGGAAGCATTATGTGCCACTGTCACCCTTTGGTTTGGAGAGTGATAACGGAAGATACCTGATTTCTGAGCCACCACATAATGAGATGCCACCAAGTCCTGGTCCTGTTCAGTCACCCGAATCAGAATCAGGATCACCAATTAGTCATGGTCCGGCACCAGTACGAGAAAGATCACCATCTCCAACTCCTAAGCCCCCAGATGATGATTTGCCATTCCCTATAGATATGTTTGCGCCATATCCACCACCGCCACCACCATCTTCTCCTCCTCCTCAATACTCTCCACCTGTATTATATGCTTTTATTCCCGGGCATAGCAGACAAAGGACGTCAATTATAATTGGTGCTGCTACATCAGGACTAATAATCTTAATAGGCTTGCTCCTATGCTATTGCGAGGTCAGGAAAAGCAGAAAACTCTACAAAGATGACAGGCCTTTACTAGTATTAAGTGATATGTCTGGTATTATGTCTATGTTTGGTTCGCACAATGTTGGTTTGGAAAATTCTGATAACAAAGATGGTAGTATTATATATGGAAAGAACCCTTCTATTGCTACGAATTTGTCCATTGGGCCTCAAGATAACAATGCCTCATTAGGTGAGGCATCATCATCAGAAGGCAAGGGGCAAGTTTTAGCCTCTACATTAAATCCTCCTCCAGGAGGATCAGGCCTTGAGCCACCACAGCGCCAGCCGCTGCCGCCACCAGCTCTTGTGCCTTGCCCCCCACCACCTCCAAGAGTAGCAGCTAGGCCTCCACCTGCTCCTCCAAAACCAGTTGCTGGTAAAAACCAACCTTCACCTCTAGGACCACTTCGTTCTAGTGAGGGGGATGAATCTGCTGATGCTCCAAAAGTAAAACTAAAGCCATTTTTCTGGGATAAGGTTGCTGCAAATCCTGATCAAGCAATGGTCTGGCATGAGATCAAATCAGGGTCATTCCAGTTCAGTGAAGAGAAGATAGAGTCTTTGTTTGGTTGCACCAACCAGTACAGAAATGAAAGAAGAAAAGAATCGCCATCCTTAGAACCTGCAGTCCAGTACATTCAGATTATTGATCCTAAGAAAGCACAGAATTTATCAATTCTTTTACGTGCTCTGAATGTGTCAACAGCAGAAATTGTTGATGCCCTTAAAGAAGGAAACGAGATTCCTGTTGAGCTCAGCCAGACATTATTGAAGATGGCACCAACAACAGACGAGGAATTGAAGCTTAGATTATTCACAGGCGACATTTCTCAACTTGCCCCCGCAGAACGGTTTCTCAAGGTTTTGGTTGACATTCCATTTGCTTTCAAACGCCTCGAGTCTCTATTGTTCATGTTTACTCTTCCAGAAGAGGTCTCAAGCATTAAGGAGTGTTTTTCAACGTTAGAGGTTTCCTGCGACAAACTAAGAAAAAGCAGGCTCTTCCTTAAACTACTCGAAGCAGTTCTCAAGACTGGAAACCGCATGAATGATGGCACATACCGTGGCGGTGCTCAAGCATTCAGGCTCGACACACTTTTGAAACTGGCAGATGTAAAAGGAACGGATAGCAAGACAACACTGCTACACTTTGTGGTTCAGGAGATTATACGTTCTGAGGGTGTAAGAGCTGTAAGAACAGCAAAAGCGAGCCGAAGCAATTCCAGTGTGAAAGCAGATGATCTTGTTGATGATACCGCCTATGAAGAATCAGAAGAGCACTACCGAAGCCTTGGCCTTCAAGTGGTGTCAGGCCTAATTAGTGAACTTGAAGATGTGAAAAGGGCTGCAGTTGTAGATGGTGATTCGCTAACAGCTGCAGTGTTGAAACTTGATCAGTCACTGACAAAGAGTGAGGAGTTGCTGAGCAATGATCTGAAGAGCTTAGAAGAAGACAGCGAGTTCCAGCATTGCCTTGCGAGTTTTGTGGAGAAAGCAAAAGAAGATGTGTCATGGCTGATGGAGGAAGAAAAGAGGATCATGGCTGAGGTGAAGAGAACAGCAGATTACTTCCATGGGAAGGCAGGAGAAGAAGAAGGGCTGCGCTTGTTTGTGACTGTGCGCGATTTCTTGAGAATGTTGGACAAGGTGTGCAAAGAGGTGGAGGAGACAACTGTAAAGCCATTGAAGGGCTCTTCCAAGAAAGAGGCTCCATCATTGCCATCATCTCCAGACACTCACAATCAGTCACCTTCTGATGTGCATAGGAGATTATTCCCAGCCATAGCAGGGCGCAGGATCCATGATTCTAGTTCTGATGATGATGGTGGTGATGATGATTGA 2589 0.4484 MELTRPGYAVIYVILLCALAKTGSEGKRWKPHEFYGDHGVLSSSLHLQGKREEQAWKHCRKELLERNNDIKDFDFEKATKFLPPNLKQNFLDCIRKIAARPSPVSEDQEHQLRKHYVPLSPFGLESDNGRYLISEPPHNEMPPSPGPVQSPESESGSPISHGPAPVRERSPSPTPKPPDDDLPFPIDMFAPYPPPPPPSSPPPQYSPPVLYAFIPGHSRQRTSIIIGAATSGLIILIGLLLCYCEVRKSRKLYKDDRPLLVLSDMSGIMSMFGSHNVGLENSDNKDGSIIYGKNPSIATNLSIGPQDNNASLGEASSSEGKGQVLASTLNPPPGGSGLEPPQRQPLPPPALVPCPPPPPRVAARPPPAPPKPVAGKNQPSPLGPLRSSEGDESADAPKVKLKPFFWDKVAANPDQAMVWHEIKSGSFQFSEEKIESLFGCTNQYRNERRKESPSLEPAVQYIQIIDPKKAQNLSILLRALNVSTAEIVDALKEGNEIPVELSQTLLKMAPTTDEELKLRLFTGDISQLAPAERFLKVLVDIPFAFKRLESLLFMFTLPEEVSSIKECFSTLEVSCDKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLADVKGTDSKTTLLHFVVQEIIRSEGVRAVRTAKASRSNSSVKADDLVDDTAYEESEEHYRSLGLQVVSGLISELEDVKRAAVVDGDSLTAAVLKLDQSLTKSEELLSNDLKSLEEDSEFQHCLASFVEKAKEDVSWLMEEEKRIMAEVKRTADYFHGKAGEEEGLRLFVTVRDFLRMLDKVCKEVEETTVKPLKGSSKKEAPSLPSSPDTHNQSPSDVHRRLFPAIAGRRIHDSSSDDDGGDDD* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1344 862 PANTHER FORMIN-LIKE PROTEIN 1 859 - -
Dod10g1344 862 MobiDBLite consensus disorder prediction 841 855 - -
Dod10g1344 862 MobiDBLite consensus disorder prediction 807 862 - -
Dod10g1344 862 PANTHER FORMIN-RELATED 1 859 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dod10g1344 862 MobiDBLite consensus disorder prediction 127 204 - -
Dod10g1344 862 SUPERFAMILY Formin homology 2 domain (FH2 domain) 404 807 - -
Dod10g1344 862 MobiDBLite consensus disorder prediction 168 204 - -
Dod10g1344 862 MobiDBLite consensus disorder prediction 334 377 - -
Dod10g1344 862 ProSiteProfiles Formin homology-2 (FH2) domain profile. 391 822 IPR015425 -
Dod10g1344 862 Gene3D Formin, FH2 domain 397 821 IPR042201 -
Dod10g1344 862 MobiDBLite consensus disorder prediction 302 396 - -
Dod10g1344 862 Pfam Formin Homology 2 Domain 393 796 IPR015425 -
Dod10g1344 862 MobiDBLite consensus disorder prediction 302 325 - -
Dod10g1344 862 SMART it6_source 391 811 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1344 Dod-Chr10 33643902 33648140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1344 371 849 FH2 protein (formin) Gene Family AT5G54650 58.918 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1344 - - lja:Lj3g3v2888350.1 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1344 10 33643902 33648140 Dod10g1344 10 33643902 33648140 ECH