Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1342 ATGGACCCCAACCTGAACCTTATTCTTCAGTCGATATTGTCCTCTTCCTCCACCTCCACCTCCTCCTCAGTGGTGGACAGTTACCCTTCTTCCATGGACCCCATGTTTTCCGGAATGAGCCTCCAATCCCTGCTGAACCTCAACCCCTCCCTCCTCCTCTCCGACTACCCCCCGATCTCCTCCCTCACCGACCACCCTCCCCTTCAATCCCCACTCCTCATACCCAAAACCGAACACCCCCCACAACCACAACCACAACCTCAACAACAACAACAATACCTCACTACTCCCCCTCATTCTCATCCTCAACCTCAACAACCCTTCAACTTCTTCTTCCCAAAACGCCCCCGCCTCGACCACCGCTACTCCTCCACCACCTGGCAGCAGTACCCCTCAACAACAAACACGTCGTCTTATTCCTCACCCGACACCTCTTCCTCTTCTTCATCCTCACCATCATCATTTCGTAAACAACCACCTTCTTCTTCTTCTTCTTGTGTGATCCCTCAGAGCAACCTTGCACGGCAGAGGAGGCTGAAGCTGAGCGAGAAGACTCGGTGCCTTCAGAAGCTGATGCCATGGGACAAGAAGATGGACCAGGCAACACTCCTCGAAGAGGCTTACAAGTACGTCAAGTTCTTGCAGGCTCAGGTCACCGTCCTCAACTCCATGCCCCAAACATCATCATCATCATCATCATCAAGGAACAACAACAACAATGGTGGTAATGGTGGTGGTGGTGGTGTTGTGTTTGGTGAGTTGGAGAGGCTGAGCAGGAATCAGGTGCTGCAGGTGCTGGTGAACTCGCCTGTTGCTCAGACCGTGATGTCGTCCCAAGGGTTGTGCGTGTTCTCCCTTGAGCAGTTCGGAATGCTGAGGAAAATGTCCGAGAGGAGGCTCCTCTTTCAGCACATGAACGACATGAACAACATGATGAACATCGCCTCTGACGATTCCAAACCTAATTTCTTCAACTGA 978 0.5225 MDPNLNLILQSILSSSSTSTSSSVVDSYPSSMDPMFSGMSLQSLLNLNPSLLLSDYPPISSLTDHPPLQSPLLIPKTEHPPQPQPQPQQQQQYLTTPPHSHPQPQQPFNFFFPKRPRLDHRYSSTTWQQYPSTTNTSSYSSPDTSSSSSSSPSSFRKQPPSSSSSCVIPQSNLARQRRLKLSEKTRCLQKLMPWDKKMDQATLLEEAYKYVKFLQAQVTVLNSMPQTSSSSSSSRNNNNNGGNGGGGGVVFGELERLSRNQVLQVLVNSPVAQTVMSSQGLCVFSLEQFGMLRKMSERRLLFQHMNDMNNMMNIASDDSKPNFFN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1342 325 MobiDBLite consensus disorder prediction 122 171 - -
Dod10g1342 325 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 15 311 IPR045843 GO:0003700|GO:0006355
Dod10g1342 325 SMART finulus 171 220 IPR011598 GO:0046983
Dod10g1342 325 MobiDBLite consensus disorder prediction 73 87 - -
Dod10g1342 325 MobiDBLite consensus disorder prediction 224 244 - -
Dod10g1342 325 Gene3D - 170 237 IPR036638 GO:0046983
Dod10g1342 325 MobiDBLite consensus disorder prediction 224 249 - -
Dod10g1342 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 165 214 IPR011598 GO:0046983
Dod10g1342 325 PANTHER TRANSCRIPTION FACTOR BHLH117 15 311 - -
Dod10g1342 325 MobiDBLite consensus disorder prediction 62 171 - -
Dod10g1342 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 224 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1342 Dod-Chr10 33638472 33639449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1342 177 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 45.833 3.82e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1342 - - aprc:113855910 196.438