Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1337 ATGACTCCACATTACAACGGTGGACACATTACAGGGAGACATAGAGTTAGATCGGCAAGTGAGGTAGGCAGTGCTCTTCCTTCTACACACCCCGAACATCGCAACAGAGCTCTCCGAAAGCTTCAACCATGGAAGGAATCCGAGTCATCTCAGCCAGGACAATCCAAGCGCAGGGGACACAGTGACTCAACTCAGAAAATCCATTTAACCCCATGGGACCTTGAATCCCTTCCACTTGAGATGAACCAAAAGGGGCTTATTTTTCACAACACAAAACACACACAAACCCAAATCCAACACCTCAAAGACTCCCTTTCCACCGCCCTTGCCTTCTTTCCACCCCTCGCAGGTTGTCTCATCATTACCGAACACGAAGACAGCACTGCCTCCTCTTACATCTCATGCAATAACGTGGGAGCGCTCTTTGTCCACGCGGCAGCAGAGAACACACGCATCGCTGACATCCTTCAACCCAAGTACGTTCCTCCCATTATCCACTCCTTCTTCCCACTCAACGGAGTCAGAAACTACCAAGGCACCTCACAGCCACTGCTGGCAGTGCAAGTAACGGAGCTAGTTGACGGCGTCTTCGTCGGCTTCACGATCAACCACGTGGCTGCAGACGGCGAGTCCTTGTGGAACTTCGTCAATTCATGGTCCGAAATCTCACGTGGTTTCCATAATCCATCCAAAATCCCTTCACTCCAACGTTTGTTCCTCAACGGCGTTGAACCGCCACTACGCTTTCCTTTCACAATTGAGCAAAACCAAAACCGTCAAAAATCAAACACACAACAACCACAACCGAAAGTGCGGATCTTCCATTTCACAAAGGAGAAAATAGCGCAGCTCAAAGCGAAAGCCAATGCAGAAGCAAACACTGAGAAGATATCTTCGTTACAAGCTCTCCTTTCTCACCTCTGGCTCTCTGTGACACGTTGCCAAGGTGTTGTTGACCCAAATGATGATGACGTTTTTTACTTCTTGGCAATAGGCGTTAGGCAGAGAATGGCTCCATCGTTGCCAGAGAATTACTTTGGCAACGCTTTGCAGATTGGTGCTGTGAGGATGAGAGCAAAGGAGCTACTTGAAGGTGGCCTCGGAAAAGCTGCTTGGGCGATGAACAAGATGGTGGCTTCGCACGGTGATGAGAAGGTGAGGAGGCACTATGAGTCTATGGCGAGAAACCCAGTTCTGCTTTATCCATGTGGCATGAGTGGTAGGAAGGCCTTGGCCACTGGCAGTTCTCCGAGGTTCAATGTTTATGGTAATGACTTTGGTTGGGGAAAGCCTGTGGCGGTTAGAACTGGGGGTTCTAACAAGAACGAGGGCATGGTTGCTGTGTTTGGTGGGGTGGAAGAAGGTAGTGTTGACATTGAAGTATGCCTCCCTTATGAGATCTTGGAGGCCATGGGAAATGACCCTGAGTTCTGA 1434 0.4951 MTPHYNGGHITGRHRVRSASEVGSALPSTHPEHRNRALRKLQPWKESESSQPGQSKRRGHSDSTQKIHLTPWDLESLPLEMNQKGLIFHNTKHTQTQIQHLKDSLSTALAFFPPLAGCLIITEHEDSTASSYISCNNVGALFVHAAAENTRIADILQPKYVPPIIHSFFPLNGVRNYQGTSQPLLAVQVTELVDGVFVGFTINHVAADGESLWNFVNSWSEISRGFHNPSKIPSLQRLFLNGVEPPLRFPFTIEQNQNRQKSNTQQPQPKVRIFHFTKEKIAQLKAKANAEANTEKISSLQALLSHLWLSVTRCQGVVDPNDDDVFYFLAIGVRQRMAPSLPENYFGNALQIGAVRMRAKELLEGGLGKAAWAMNKMVASHGDEKVRRHYESMARNPVLLYPCGMSGRKALATGSSPRFNVYGNDFGWGKPVAVRTGGSNKNEGMVAVFGGVEEGSVDIEVCLPYEILEAMGNDPEF* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1337 477 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 60 477 - -
Dod10g1337 477 Pfam Transferase family 64 476 - -
Dod10g1337 477 Gene3D - 251 473 IPR023213 -
Dod10g1337 477 MobiDBLite consensus disorder prediction 1 66 - -
Dod10g1337 477 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 60 477 - -
Dod10g1337 477 Gene3D - 52 246 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1337 Dod-Chr10 33515879 33518364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1337 99 466 Monolignol Biosynthesis Gene Families AT5G48930 29.156 2.18e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1337 - - gmx:100797643 516.153