Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1330 ATGAAGAGCTGCGAGCTGTGCAAGGTTCCGGCTAGGACCTTCTGCGAGTCCGACCAGGCAAGCCTATGTTGGGACTGCGACGCCAACGTTCACGGCGCCAACTTCCTCGTCGCTAGACACACACGAACCCTCCTCTGCCACGCCTGCCAGTCCCCGACACCCTGGAAGGCCTCCGGCGACAGGCTTGGAAACACCGTCTCCCTTTGCGAGATGTGCTCCGGCGGCACCAAGGTCGACGGCGAAGAGAGCCAAGGAGGCAATGACGACGACATAGACACCGAGGACGACGATCTCGGCGACGGCGAGGACGAGGAAGATATTGACGATGACGACGAGGATGACGAGGTTGGCGGCGACGACGAGGACGAGGACGGAGATAACCAGGTTGTTCCTTGGTCCTCTACGGCGCCGCCGCCTCCTGCTCCGAGCTCCTCCAGCAGCGAAGAGTCGGTTAGCCGGTGCAACCCCGGAGACGAGGATGTTTCTGAGACAATATCATTGAAACGACGTCGTCACGACGAGGATCACGATTTCCAGGAGGGTTCGAACGGTGGGGCATGTAAACGGCGGTATGGTGGAGAGTGGAGAGAGGAGGTTGGTCGGTTAGGGTGCGGCGGAGAACCGCCGTCGAAGCGGGCGTTGAACGGTGGAGGGAGAGGTTGA 663 0.6109 MKSCELCKVPARTFCESDQASLCWDCDANVHGANFLVARHTRTLLCHACQSPTPWKASGDRLGNTVSLCEMCSGGTKVDGEESQGGNDDDIDTEDDDLGDGEDEEDIDDDDEDDEVGGDDEDEDGDNQVVPWSSTAPPPPAPSSSSSEESVSRCNPGDEDVSETISLKRRRHDEDHDFQEGSNGGACKRRYGGEWREEVGRLGCGGEPPSKRALNGGGRG* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1330 220 MobiDBLite consensus disorder prediction 75 189 - -
Dod10g1330 220 MobiDBLite consensus disorder prediction 162 183 - -
Dod10g1330 220 CDD Bbox1_BBX-like 4 45 - -
Dod10g1330 220 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Dod10g1330 220 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 191 - -
Dod10g1330 220 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Dod10g1330 220 MobiDBLite consensus disorder prediction 85 127 - -
Dod10g1330 220 SMART bboxneu5 1 45 IPR000315 GO:0008270
Dod10g1330 220 PANTHER - 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1330 Dod-Chr10 33416019 33417556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1330 2 141 C2C2-CO-like Transcription Factor Family AT4G27310 44.643 6.09e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod10g1330 zf-B_box 2.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1330 - - lang:109338335 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1330 10 33416019 33417556 Dod10g1330 10 33416019 33417556 ECH
Dod10g1330 10 33416019 33417556 Dod03g2194 03 51579418 51580708 PCT