Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1324 ATGACAAATTTTGTTATAATCATATTAATGGTTTACAACCCTCCCACGACCAATTTGGAGTTTTACTCTTTAAACAATGTCTGGAGAGGTGTGGAAACTGGAAAGAGTTGCAGGCTGAGGTGGCTGAATTATTTAAGGCCGAATATCAAAATAGGGAACTACACTCAAGAAGAGGAAATCATTATCAAGCAGCTCGAGCTGGATAACATTCAAAGCTTTCCCTTCAAAAGCAGATGGTCTGCAATTGCAGCTCAGCCGCCAGGAAGATCGGACAATGAAATCAAAAACTATTGGCATTCCAATCTCAAGAAGCCATTTCATCACATCAAGTTCACACATGAAAAATCTCAAGGTTCCGAATCCAAGGATCAAACCCCAATTGAACCAACAGCATCAAACAACAGCAATAACATAATTGGTTCTTTCCAAAGCATTGAAGCAGCCTCTGAATCTATCAATTCTTGTTCATCTTCTACCCCATCATCCTCAAGAGATTTCCCAGTTATCACACATCATTATGTAGCTGCCGGCAATGAGAAAATTTGGTTCCGGAAGTTGAATTTCCGAATTATTTTCTGGATGAGTACCAAGAGCATATGA 600 0.395 MTNFVIIILMVYNPPTTNLEFYSLNNVWRGVETGKSCRLRWLNYLRPNIKIGNYTQEEEIIIKQLELDNIQSFPFKSRWSAIAAQPPGRSDNEIKNYWHSNLKKPFHHIKFTHEKSQGSESKDQTPIEPTASNNSNNIIGSFQSIEAASESINSCSSSTPSSSRDFPVITHHYVAAGNEKIWFRKLNFRIIFWMSTKSI* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1324 199 Pfam Myb-like DNA-binding domain 54 101 IPR001005 -
Dod10g1324 199 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 33 165 - -
Dod10g1324 199 ProSiteProfiles Myb-like domain profile. 46 102 IPR001005 -
Dod10g1324 199 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 33 165 - -
Dod10g1324 199 SMART sant 50 104 IPR001005 -
Dod10g1324 199 Gene3D - 53 130 - -
Dod10g1324 199 MobiDBLite consensus disorder prediction 113 136 - -
Dod10g1324 199 MobiDBLite consensus disorder prediction 122 136 - -
Dod10g1324 199 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Dod10g1324 199 Gene3D - 25 51 - -
Dod10g1324 199 CDD SANT 53 102 IPR001005 -
Dod10g1324 199 SUPERFAMILY Homeodomain-like 33 113 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1324 Dod-Chr10 33309338 33310890 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1324 31 154 MYB Transcription Factor Family AT2G31180 44.000 4.51e-26 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod10g1324 Myb_DNA-binding 7.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1324 K09422 - gmx:100778518 105.531