Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1321 ATGTCCTTGCTGCTTCTCACCACAACTGAGCAACTTCACAGAAAGGCTTTGTCAATGGAGTTTGACCTTGAAAACCCCTTAGAAAACTTCCACGACCTTCCCTTTGATGCTGTATCGTCTCTTTTCCTCATTGAATCTGACCACATCCCACCAGAGCATTACTTTGAGACCCTCAAAGCCAGCGATTTTGACATATCTGTTAGAAGCCATGTCATTTCCTTGATCTCTCAGTTGTCCTTCACCTTCGATCCAGTTCTGCCTTATCTAGCTACCAACTATCTAGATCGGTACCTGGCTAACCAAGGGAAATTGCAACCAAAGCCATGGGCCAACAAGCTGCTTGCAATCTCTTGCTTCTCTCTAGCTGCCAAGATGTTGAAAACAGACTACTCTGCCACTGATGTCCAGGCTCTCCTGAATCATGGTGATGGTGGAGTCATTTTTGAGGCACAAACAATACAAAGAATGGAAGCTCTTGTTTTGGGAGCTCTACAGTGGAGGATGCGTTCCATCACCCCATTCTCTTTCATCCCTTTCTTCATGGATTTGATCGGCCTCAAAGACCCCGCATCGACCCAGGTTCTGAAAGATCGAGCATCCCAAATCATATTGAAGTCACAAAGAGAGATAAAGGTTTTGGAATTCAAGCCATCGATTATTGCTGCATCAGCCCTTTTGTCTGCTTCACATGAGTTGTTTCCCTTTCAACACCCGTGCTTCTCAAGAGCAATATCTGATTGTTCATATGTAAATAAAGAAAGTATGCTGCAGTGCTACAATGTCATACAGGACATAGCTAGGGAGGAGTACGAATCTGTGTTCAATGTAAATTCAAGTTCAGACACACCGGTTAATGTGCTAGACCAGCATTTTCTGAGCTTGGAAAGTGAAAAAACCAACGGAACCAACGTAGCTCTTGGTCCCAATACTCTGATCAAGAGAAGGAAAATCACTGGTTATGGTAACAATCACGCGCTCCATATTTCCCATTTTCATCATCAATGCTGA 1008 0.4385 MSLLLLTTTEQLHRKALSMEFDLENPLENFHDLPFDAVSSLFLIESDHIPPEHYFETLKASDFDISVRSHVISLISQLSFTFDPVLPYLATNYLDRYLANQGKLQPKPWANKLLAISCFSLAAKMLKTDYSATDVQALLNHGDGGVIFEAQTIQRMEALVLGALQWRMRSITPFSFIPFFMDLIGLKDPASTQVLKDRASQIILKSQREIKVLEFKPSIIAASALLSASHELFPFQHPCFSRAISDCSYVNKESMLQCYNVIQDIAREEYESVFNVNSSSDTPVNVLDQHFLSLESEKTNGTNVALGPNTLIKRRKITGYGNNHALHISHFHHQC* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1321 335 Pfam Cyclin, C-terminal domain 171 280 IPR004367 -
Dod10g1321 335 SUPERFAMILY Cyclin-like 32 168 IPR036915 -
Dod10g1321 335 SMART Cyclin_C_2 171 286 IPR004367 -
Dod10g1321 335 Gene3D - 51 169 - -
Dod10g1321 335 Pfam Cyclin, N-terminal domain 43 168 IPR006671 -
Dod10g1321 335 PANTHER CYCLINS 23 308 IPR039361 -
Dod10g1321 335 CDD CYCLIN 68 161 IPR013763 -
Dod10g1321 335 SMART cyclin_7 69 162 IPR013763 -
Dod10g1321 335 SUPERFAMILY Cyclin-like 153 267 IPR036915 -
Dod10g1321 335 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 23 308 - -
Dod10g1321 335 Gene3D - 40 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1321 Dod-Chr10 33175642 33178081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1321 19 318 Core Cell Cycle Gene Families AT4G03270 46.855 1.23e-79 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1321 K18812 - gmx:100799951 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1321 10 33175642 33178081 Dod10g1321 10 33175642 33178081 ECH
Dod10g1321 10 33175642 33178081 Dod03g2175 03 51171539 51173763 PCT